Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.29□□□□□ -1.4
CDH13P55290 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CDH13P55290 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 OR11H13P-201ENST00000359695 979 ntBASIC6.29□□□□□ -1.4
CDH13P55290 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 RNA5SP350-201ENST00000363298 111 ntBASIC6.29□□□□□ -1.4
CDH13P55290 SNORD8-201ENST00000363915 110 ntBASIC6.29□□□□□ -1.4
CDH13P55290 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH13P55290 U3.52-201ENST00000384034 216 ntBASIC6.29□□□□□ -1.4
CDH13P55290 RPL12P23-201ENST00000405880 490 ntBASIC6.29□□□□□ -1.4
CDH13P55290 U3.43-201ENST00000410734 213 ntBASIC6.29□□□□□ -1.4
CDH13P55290 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH13P55290 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH13P55290 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH13P55290 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CDH13P55290 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH13P55290 RN7SL165P-201ENST00000477476 291 ntBASIC6.29□□□□□ -1.4
CDH13P55290 RPL7AP30-201ENST00000482859 796 ntBASIC6.29□□□□□ -1.4
CDH13P55290 AC117500.1-201ENST00000497352 755 ntBASIC6.29□□□□□ -1.4
CDH13P55290 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH13P55290 RN7SKP248-201ENST00000516278 305 ntBASIC6.29□□□□□ -1.4
CDH13P55290 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH13P55290 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH13P55290 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH13P55290 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH13P55290 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.29□□□□□ -1.4
CDH13P55290 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH13P55290 AC010287.1-201ENST00000566916 357 ntBASIC6.29□□□□□ -1.4
CDH13P55290 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH13P55290 MIR378H-201ENST00000579966 83 ntBASIC6.29□□□□□ -1.4
CDH13P55290 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH13P55290 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.29□□□□□ -1.4
CDH13P55290 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH13P55290 RPS4XP21-201ENST00000603814 750 ntBASIC6.29□□□□□ -1.4
CDH13P55290 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.29□□□□□ -1.4
CDH13P55290 AL137246.2-201ENST00000613439 662 ntBASIC6.29□□□□□ -1.4
CDH13P55290 AL445649.1-201ENST00000615941 691 ntBASIC6.29□□□□□ -1.4
CDH13P55290 AC005514.1-201ENST00000623521 208 ntBASIC6.29□□□□□ -1.4
CDH13P55290 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH13P55290 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH13P55290 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH13P55290 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH13P55290 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.29□□□□□ -1.4
CDH13P55290 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH13P55290 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 BIN2P1-201ENST00000504996 1530 ntBASIC6.29□□□□□ -1.4
CDH13P55290 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CDH13P55290 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH13P55290 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH13P55290 OR5M2P-202ENST00000641241 4242 ntBASIC6.29□□□□□ -1.4
CDH13P55290 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH13P55290 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH13P55290 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CDH13P55290 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH13P55290 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH13P55290 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH13P55290 AL662795.2-201ENST00000624252 3706 ntBASIC6.28□□□□□ -1.4
CDH13P55290 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH13P55290 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
CDH13P55290 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH13P55290 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH13P55290 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH13P55290 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CDH13P55290 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CDH13P55290 FUNDC2P3-201ENST00000334716 533 ntBASIC6.28□□□□□ -1.4
CDH13P55290 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CDH13P55290 RNA5SP140-201ENST00000364524 92 ntBASIC6.28□□□□□ -1.4
CDH13P55290 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CDH13P55290 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH13P55290 RNA5SP251-201ENST00000410614 137 ntBASIC6.28□□□□□ -1.4
CDH13P55290 AC116036.1-201ENST00000412199 367 ntBASIC6.28□□□□□ -1.4
CDH13P55290 RANP6-201ENST00000413691 644 ntBASIC6.28□□□□□ -1.4
CDH13P55290 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH13P55290 AC083855.1-201ENST00000440041 258 ntBASIC6.28□□□□□ -1.4
CDH13P55290 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.28□□□□□ -1.4
CDH13P55290 AL845321.1-201ENST00000444603 348 ntBASIC6.28□□□□□ -1.4
CDH13P55290 UBBP5-201ENST00000446970 266 ntBASIC6.28□□□□□ -1.4
CDH13P55290 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.28□□□□□ -1.4
CDH13P55290 SNX18P26-201ENST00000458433 740 ntBASIC6.28□□□□□ -1.4
CDH13P55290 RN7SL70P-201ENST00000478322 302 ntBASIC6.28□□□□□ -1.4
CDH13P55290 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH13P55290 RN7SKP196-201ENST00000516267 345 ntBASIC6.28□□□□□ -1.4
CDH13P55290 RNU4-18P-201ENST00000516751 149 ntBASIC6.28□□□□□ -1.4
CDH13P55290 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH13P55290 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.28□□□□□ -1.4
CDH13P55290 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.28□□□□□ -1.4
CDH13P55290 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CDH13P55290 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms