Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.86□□□□□ -1.47
SOX2P48431 NMNAT1P3-201ENST00000457517 888 ntBASIC5.86□□□□□ -1.47
SOX2P48431 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 AC090543.1-201ENST00000492168 485 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AC010460.2-201ENST00000509054 677 ntBASIC5.86□□□□□ -1.47
SOX2P48431 EIF3KP1-201ENST00000513279 656 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC5.86□□□□□ -1.47
SOX2P48431 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX2P48431 KCTD9P4-201ENST00000526766 1166 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.86□□□□□ -1.47
SOX2P48431 BMS1P8-201ENST00000565049 1178 ntBASIC5.86□□□□□ -1.47
SOX2P48431 PRELID3BP3-201ENST00000584963 545 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AL589765.5-201ENST00000596133 515 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC5.86□□□□□ -1.47
SOX2P48431 AF129408.1-201ENST00000608767 431 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AP003499.2-201ENST00000624100 483 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX2P48431 AC026108.1-201ENST00000635444 547 ntBASIC5.86□□□□□ -1.47
SOX2P48431 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SOX2P48431 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC5.86□□□□□ -1.47
SOX2P48431 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX2P48431 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SOX2P48431 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX2P48431 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SOX2P48431 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.86□□□□□ -1.47
SOX2P48431 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SOX2P48431 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX2P48431 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX2P48431 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 API5P1-201ENST00000424316 1510 ntBASIC5.85□□□□□ -1.47
SOX2P48431 AC034229.2-201ENST00000566945 2508 ntBASIC5.85□□□□□ -1.47
SOX2P48431 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SOX2P48431 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SOX2P48431 PPIAP26-201ENST00000377951 522 ntBASIC5.85□□□□□ -1.47
SOX2P48431 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX2P48431 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX2P48431 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX2P48431 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 AL359885.1-201ENST00000415786 903 ntBASIC5.85□□□□□ -1.47
SOX2P48431 NPM1P26-201ENST00000426339 738 ntBASIC5.85□□□□□ -1.47
SOX2P48431 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX2P48431 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX2P48431 AK3P5-201ENST00000432033 519 ntBASIC5.85□□□□□ -1.47
SOX2P48431 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX2P48431 MYL6P3-201ENST00000436904 432 ntBASIC5.85□□□□□ -1.47
SOX2P48431 AC007790.1-201ENST00000439081 782 ntBASIC5.85□□□□□ -1.47
SOX2P48431 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX2P48431 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX2P48431 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX2P48431 RN7SL216P-201ENST00000471607 298 ntBASIC5.85□□□□□ -1.47
SOX2P48431 RPL17P2-201ENST00000491913 451 ntBASIC5.85□□□□□ -1.47
SOX2P48431 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX2P48431 NPM1P27-201ENST00000502784 830 ntBASIC5.85□□□□□ -1.47
SOX2P48431 MTCO2P9-201ENST00000503214 694 ntBASIC5.85□□□□□ -1.47
SOX2P48431 AC093801.2-201ENST00000503966 1050 ntBASIC5.85□□□□□ -1.47
SOX2P48431 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX2P48431 KCTD9P6-201ENST00000522306 950 ntBASIC5.85□□□□□ -1.47
SOX2P48431 IGKV2-4-201ENST00000523070 340 ntBASIC5.85□□□□□ -1.47
SOX2P48431 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX2P48431 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX2P48431 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX2P48431 OR52K3P-201ENST00000531655 943 ntBASIC5.85□□□□□ -1.47
SOX2P48431 PHBP2-201ENST00000532859 806 ntBASIC5.85□□□□□ -1.47
SOX2P48431 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX2P48431 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SOX2P48431 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX2P48431 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX2P48431 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SOX2P48431 MIR4262-201ENST00000578394 54 ntBASIC5.85□□□□□ -1.47
SOX2P48431 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC5.85□□□□□ -1.47
SOX2P48431 AL133247.2-201ENST00000603236 482 ntBASIC5.85□□□□□ -1.47
SOX2P48431 AL356752.1-201ENST00000615844 593 ntBASIC5.85□□□□□ -1.47
SOX2P48431 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.85□□□□□ -1.47
SOX2P48431 AC006927.4-201ENST00000639187 543 ntBASIC5.85□□□□□ -1.47
SOX2P48431 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX2P48431 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX2P48431 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX2P48431 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.85□□□□□ -1.47
SOX2P48431 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.85□□□□□ -1.47
SOX2P48431 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SOX2P48431 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.85□□□□□ -1.47
SOX2P48431 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SOX2P48431 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms