Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
RXRBP28702 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.82□□□□□ -1
RXRBP28702 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC8.82□□□□□ -1
RXRBP28702 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
RXRBP28702 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 AL451064.2-201ENST00000623514 1654 ntBASIC8.81□□□□□ -1
RXRBP28702 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC8.81□□□□□ -1
RXRBP28702 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 AL162171.3-201ENST00000617439 3178 ntBASIC8.81□□□□□ -1
RXRBP28702 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 AL035405.1-201ENST00000400795 710 ntBASIC8.81□□□□□ -1
RXRBP28702 FABP12P1-201ENST00000401911 322 ntBASIC8.81□□□□□ -1
RXRBP28702 UQCRFS1P3-201ENST00000407697 385 ntBASIC8.81□□□□□ -1
RXRBP28702 RNU4-34P-201ENST00000410431 124 ntBASIC8.81□□□□□ -1
RXRBP28702 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC8.81□□□□□ -1
RXRBP28702 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC8.81□□□□□ -1
RXRBP28702 UBE2V2P1-201ENST00000434717 398 ntBASIC8.81□□□□□ -1
RXRBP28702 DNAJA1P6-201ENST00000437347 354 ntBASIC8.81□□□□□ -1
RXRBP28702 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC8.81□□□□□ -1
RXRBP28702 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.81□□□□□ -1
RXRBP28702 RPS15AP29-201ENST00000445539 400 ntBASIC8.81□□□□□ -1
RXRBP28702 PPIAP7-201ENST00000454070 489 ntBASIC8.81□□□□□ -1
RXRBP28702 AL583856.1-201ENST00000454078 1101 ntBASIC8.81□□□□□ -1
RXRBP28702 CST12P-201ENST00000457644 362 ntBASIC8.81□□□□□ -1
RXRBP28702 RPSAP37-201ENST00000470913 821 ntBASIC8.81□□□□□ -1
RXRBP28702 AC063943.2-201ENST00000495697 534 ntBASIC8.81□□□□□ -1
RXRBP28702 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
RXRBP28702 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC8.81□□□□□ -1
RXRBP28702 AC120036.3-201ENST00000517826 292 ntBASIC8.81□□□□□ -1
RXRBP28702 CDH12P4-201ENST00000517835 295 ntBASIC8.81□□□□□ -1
RXRBP28702 CDH12P3-201ENST00000517935 295 ntBASIC8.81□□□□□ -1
RXRBP28702 CDH12P1-201ENST00000518435 295 ntBASIC8.81□□□□□ -1
RXRBP28702 AP000620.1-201ENST00000527147 504 ntBASIC8.81□□□□□ -1
RXRBP28702 AC233266.2-201ENST00000567067 528 ntBASIC8.81□□□□□ -1
RXRBP28702 SETP3-201ENST00000581726 813 ntBASIC8.81□□□□□ -1
RXRBP28702 AL137246.2-201ENST00000613439 662 ntBASIC8.81□□□□□ -1
RXRBP28702 AC037198.3-201ENST00000616754 526 ntBASIC8.81□□□□□ -1
RXRBP28702 AC068787.1-201ENST00000623908 691 ntBASIC8.81□□□□□ -1
RXRBP28702 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 AC104581.5-201ENST00000624171 7141 ntBASIC8.81□□□□□ -1
RXRBP28702 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC8.81□□□□□ -1
RXRBP28702 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 CYP2G2P-201ENST00000594920 1485 ntBASIC8.81□□□□□ -1
RXRBP28702 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC8.81□□□□□ -1
RXRBP28702 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC8.81□□□□□ -1
RXRBP28702 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.81□□□□□ -1
RXRBP28702 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC8.8□□□□□ -1
RXRBP28702 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC8.8□□□□□ -1
RXRBP28702 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.8□□□□□ -1
RXRBP28702 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC8.8□□□□□ -1
RXRBP28702 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 RNU6-650P-201ENST00000365658 111 ntBASIC8.8□□□□□ -1
RXRBP28702 MT-RNR1-201ENST00000389680 954 ntBASIC8.8□□□□□ -1
RXRBP28702 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC8.8□□□□□ -1
RXRBP28702 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 U3.43-201ENST00000410734 213 ntBASIC8.8□□□□□ -1
RXRBP28702 AL929472.1-201ENST00000417484 429 ntBASIC8.8□□□□□ -1
RXRBP28702 MTND5P25-201ENST00000430499 799 ntBASIC8.8□□□□□ -1
RXRBP28702 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.8□□□□□ -1
RXRBP28702 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC8.8□□□□□ -1
RXRBP28702 AC002486.2-201ENST00000447806 590 ntBASIC8.8□□□□□ -1
RXRBP28702 RPL5P9-201ENST00000448118 886 ntBASIC8.8□□□□□ -1
RXRBP28702 PRDX1P1-201ENST00000449329 596 ntBASIC8.8□□□□□ -1
RXRBP28702 MTND2P8-201ENST00000450555 1025 ntBASIC8.8□□□□□ -1
RXRBP28702 AC133965.1-201ENST00000452984 354 ntBASIC8.8□□□□□ -1
RXRBP28702 AC093166.2-201ENST00000455969 1017 ntBASIC8.8□□□□□ -1
RXRBP28702 TPTE2P5-203ENST00000458118 728 ntBASIC8.8□□□□□ -1
RXRBP28702 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.8□□□□□ -1
RXRBP28702 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC8.8□□□□□ -1
RXRBP28702 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC8.8□□□□□ -1
RXRBP28702 AC010627.1-201ENST00000503819 1294 ntBASIC8.8□□□□□ -1
RXRBP28702 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC8.8□□□□□ -1
RXRBP28702 AC095052.1-201ENST00000509955 863 ntBASIC8.8□□□□□ -1
RXRBP28702 AL117351.2-201ENST00000513571 157 ntBASIC8.8□□□□□ -1
RXRBP28702 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC8.8□□□□□ -1
RXRBP28702 Y_RNA.667-201ENST00000516212 107 ntBASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms