Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC245452.2-201ENST00000435222 392 ntBASIC6.96□□□□□ -1.3
RB1P06400 MTATP6P1-201ENST00000514057 681 ntBASIC6.96□□□□□ -1.3
RB1P06400 RNU6-964P-201ENST00000516524 69 ntBASIC6.96□□□□□ -1.3
RB1P06400 RN7SKP35-201ENST00000517210 151 ntBASIC6.96□□□□□ -1.3
RB1P06400 AC021733.2-201ENST00000518830 497 ntBASIC6.96□□□□□ -1.3
RB1P06400 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.96□□□□□ -1.3
RB1P06400 AC092332.1-201ENST00000563684 829 ntBASIC6.96□□□□□ -1.3
RB1P06400 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.96□□□□□ -1.3
RB1P06400 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.96□□□□□ -1.3
RB1P06400 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.96□□□□□ -1.3
RB1P06400 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
RB1P06400 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.96□□□□□ -1.3
RB1P06400 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.96□□□□□ -1.3
RB1P06400 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.96□□□□□ -1.3
RB1P06400 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
RB1P06400 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RB1P06400 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.96□□□□□ -1.3
RB1P06400 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.96□□□□□ -1.3
RB1P06400 AL669831.5-218ENST00000591702 1873 ntBASIC6.96□□□□□ -1.3
RB1P06400 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
RB1P06400 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RB1P06400 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RB1P06400 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.95□□□□□ -1.3
RB1P06400 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RB1P06400 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 AC079949.2-201ENST00000617117 2933 ntBASIC6.95□□□□□ -1.3
RB1P06400 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RB1P06400 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.95□□□□□ -1.3
RB1P06400 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
RB1P06400 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 AL031985.1-201ENST00000392713 418 ntBASIC6.95□□□□□ -1.3
RB1P06400 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.95□□□□□ -1.3
RB1P06400 CDY17P-201ENST00000414121 1282 ntBASIC6.95□□□□□ -1.3
RB1P06400 RPS3P2-201ENST00000421346 701 ntBASIC6.95□□□□□ -1.3
RB1P06400 AC066692.1-201ENST00000421721 457 ntBASIC6.95□□□□□ -1.3
RB1P06400 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RB1P06400 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.95□□□□□ -1.3
RB1P06400 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.95□□□□□ -1.3
RB1P06400 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.95□□□□□ -1.3
RB1P06400 DEFA11P-201ENST00000446470 261 ntBASIC6.95□□□□□ -1.3
RB1P06400 AC023194.2-201ENST00000465398 406 ntBASIC6.95□□□□□ -1.3
RB1P06400 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.95□□□□□ -1.3
RB1P06400 RPL5P14-201ENST00000494197 878 ntBASIC6.95□□□□□ -1.3
RB1P06400 SNX18P24-201ENST00000505249 671 ntBASIC6.95□□□□□ -1.3
RB1P06400 OR7E99P-201ENST00000505750 922 ntBASIC6.95□□□□□ -1.3
RB1P06400 AC025458.1-201ENST00000506046 166 ntBASIC6.95□□□□□ -1.3
RB1P06400 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.95□□□□□ -1.3
RB1P06400 LDHAP1-201ENST00000509421 992 ntBASIC6.95□□□□□ -1.3
RB1P06400 AC095052.1-201ENST00000509955 863 ntBASIC6.95□□□□□ -1.3
RB1P06400 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.95□□□□□ -1.3
RB1P06400 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.95□□□□□ -1.3
RB1P06400 AL591767.3-201ENST00000554632 525 ntBASIC6.95□□□□□ -1.3
RB1P06400 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.95□□□□□ -1.3
RB1P06400 AC119501.1-201ENST00000603646 475 ntBASIC6.95□□□□□ -1.3
RB1P06400 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.95□□□□□ -1.3
RB1P06400 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.95□□□□□ -1.3
RB1P06400 FAM27E2-201ENST00000619668 403 ntBASIC6.95□□□□□ -1.3
RB1P06400 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.95□□□□□ -1.3
RB1P06400 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.95□□□□□ -1.3
RB1P06400 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.95□□□□□ -1.3
RB1P06400 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
RB1P06400 EIF3EP1-201ENST00000433978 1316 ntBASIC6.95□□□□□ -1.3
RB1P06400 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.95□□□□□ -1.3
RB1P06400 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RB1P06400 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
RB1P06400 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.94□□□□□ -1.3
RB1P06400 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.94□□□□□ -1.3
RB1P06400 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.94□□□□□ -1.3
RB1P06400 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
RB1P06400 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
RB1P06400 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
RB1P06400 SNORA51.9-201ENST00000384295 124 ntBASIC6.94□□□□□ -1.3
RB1P06400 SNORA17A-201ENST00000391185 133 ntBASIC6.94□□□□□ -1.3
RB1P06400 AL049697.3-201ENST00000406493 982 ntBASIC6.94□□□□□ -1.3
RB1P06400 CHEK2P5-201ENST00000423877 246 ntBASIC6.94□□□□□ -1.3
RB1P06400 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.94□□□□□ -1.3
RB1P06400 MED28P4-201ENST00000433137 572 ntBASIC6.94□□□□□ -1.3
RB1P06400 MORF4L1P5-201ENST00000433352 961 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms