Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
DUX4Q9UBX2 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.73□□□□□ -1.49
DUX4Q9UBX2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.73□□□□□ -1.49
DUX4Q9UBX2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.73□□□□□ -1.49
DUX4Q9UBX2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
DUX4Q9UBX2 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
DUX4Q9UBX2 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.73□□□□□ -1.49
DUX4Q9UBX2 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
DUX4Q9UBX2 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
DUX4Q9UBX2 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
DUX4Q9UBX2 AL512353.3-201ENST00000417517 1326 ntBASIC5.73□□□□□ -1.49
DUX4Q9UBX2 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC009120.2-204ENST00000621548 2032 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 RN7SKP118-201ENST00000364331 330 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 U3.23-201ENST00000391132 200 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 PUDPP2-201ENST00000431423 643 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 NMNAT1P3-201ENST00000457517 888 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC108751.3-201ENST00000461814 1020 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC114728.1-201ENST00000488289 483 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 RN7SL187P-201ENST00000495587 303 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC093325.1-201ENST00000508378 326 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 IGLC4-201ENST00000517690 248 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 IGHV1-14-201ENST00000523391 241 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC021820.1-201ENST00000525564 808 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AP005639.1-201ENST00000526939 192 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AP002004.1-206ENST00000532441 876 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC140063.1-201ENST00000541343 259 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 NPM1P5-201ENST00000557228 838 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC007494.1-201ENST00000562293 760 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 MIR4312-201ENST00000579909 76 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC005858.3-201ENST00000624756 589 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 WDR95P-201ENST00000425638 1542 ntBASIC5.72□□□□□ -1.49
DUX4Q9UBX2 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
DUX4Q9UBX2 NCOA4P2-201ENST00000340589 1813 ntBASIC5.71□□□□□ -1.49
DUX4Q9UBX2 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
DUX4Q9UBX2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.71□□□□□ -1.49
DUX4Q9UBX2 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 RACGAP1P-201ENST00000550663 1879 ntBASIC5.71□□□□□ -1.5
DUX4Q9UBX2 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 AL136100.1-201ENST00000407696 330 ntBASIC5.71□□□□□ -1.5
DUX4Q9UBX2 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 RPL7AP14-201ENST00000424041 802 ntBASIC5.71□□□□□ -1.5
DUX4Q9UBX2 AL590128.1-201ENST00000433407 286 ntBASIC5.71□□□□□ -1.5
DUX4Q9UBX2 CHCHD4P5-201ENST00000436684 427 ntBASIC5.71□□□□□ -1.5
DUX4Q9UBX2 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 RPL23AP28-201ENST00000448062 470 ntBASIC5.71□□□□□ -1.5
DUX4Q9UBX2 GOT2P2-201ENST00000450663 1251 ntBASIC5.71□□□□□ -1.5
DUX4Q9UBX2 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.71□□□□□ -1.5
DUX4Q9UBX2 MEF2AP1-201ENST00000454867 863 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms