Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC061999.1-201ENST00000624454 177 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC080188.3-201ENST00000624842 748 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC013488.1-201ENST00000526618 1838 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC010132.4-201ENST00000569883 1368 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AC120036.2-201ENST00000509729 1474 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 MKI67P1-201ENST00000604297 1460 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AL929472.1-201ENST00000417484 429 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AL139415.1-201ENST00000424862 352 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 RPS6P14-201ENST00000425165 719 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AL596268.1-201ENST00000427910 1048 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 TVP23CP1-201ENST00000450317 639 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 NFU1-207ENST00000462320 558 ntTSL 4 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 RN7SL267P-201ENST00000485107 261 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AC122714.1-201ENST00000502510 459 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 RN7SKP196-201ENST00000516267 345 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 RN7SKP5-201ENST00000517045 272 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AL162632.2-201ENST00000553933 399 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AC004232.2-201ENST00000574245 821 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 RN7SL32P-201ENST00000580514 281 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AC139493.1-201ENST00000604368 397 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AP002345.2-201ENST00000609961 904 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 MIR6070-201ENST00000613967 103 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AC005514.1-201ENST00000623521 208 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 PSMC1P4-201ENST00000515236 1327 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 RAD17P2-201ENST00000451754 1977 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 CASC19-255ENST00000641733 1385 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 TNPO1P2-201ENST00000426249 2665 ntBASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.44□□□□□ -1.22
CDK5RAP3Q96JB5 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 CCDC150P1-201ENST00000537123 2215 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC023245.2-201ENST00000530760 2978 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AL359694.2-201ENST00000567753 1615 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC019178.1-201ENST00000392337 440 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AL590635.1-201ENST00000406314 586 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC013470.3-201ENST00000420252 1194 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 E2F6P1-201ENST00000428850 745 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC083855.1-201ENST00000440041 258 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 E2F6P3-201ENST00000441743 743 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 ZNF736P11Y-201ENST00000442535 1213 ntBASIC7.43□□□□□ -1.22
CDK5RAP3Q96JB5 ZNF736P12Y-201ENST00000443152 1243 ntBASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms