Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 PABPC1P9-201ENST00000426076 1612 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 HK1-203ENST00000360289 3961 ntTSL 5 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 KBTBD4-204ENST00000526005 2444 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 RN7SKP184-201ENST00000362348 333 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 RNU6-1318P-201ENST00000365389 103 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 CLLU1OS-201ENST00000378487 686 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 SNORA51.7-201ENST00000384171 134 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 SNORD65C-201ENST00000390962 71 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 MTCO3P40-201ENST00000392516 676 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 AL034417.1-201ENST00000399343 800 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 RPL23AP39-201ENST00000415533 405 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 AL513302.1-201ENST00000415679 428 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 AC007742.1-201ENST00000425789 329 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 ASS1P5-201ENST00000435496 1239 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 ELOCP26-201ENST00000436067 329 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 AL050341.1-201ENST00000447743 313 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 FAR2P1-206ENST00000449736 709 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 RPS29P25-201ENST00000481709 171 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 ALG13-214ENST00000482742 620 ntTSL 2 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 DKK2-202ENST00000510463 908 ntTSL 3 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 BTG1P1-201ENST00000540396 508 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 EGLN3P1-201ENST00000541727 720 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 AC092133.1-201ENST00000565828 719 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 AC006504.6-201ENST00000590142 199 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 AP001554.1-201ENST00000604533 376 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 AL021368.3-201ENST00000607119 578 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 AC009779.8-202ENST00000607990 932 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 AP001521.2-201ENST00000608772 546 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 AL359880.1-201ENST00000621879 266 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 AP003068.4-201ENST00000623192 802 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 TUBA1A-202ENST00000301071 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 EIF4BP2-201ENST00000416702 1794 ntBASIC8.99□□□□□ -0.97
LRCH3Q96II8 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 LINC01299-201ENST00000520902 2634 ntTSL 2 BASIC8.99□□□□□ -0.97
LRCH3Q96II8 ASB8-205ENST00000536549 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LRCH3Q96II8 CSTF3-AS1-201ENST00000500025 2031 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AGTPBP1-202ENST00000357081 4393 ntTSL 5 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 NYAP2-201ENST00000272907 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 CHURC1-206ENST00000552002 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 TEX11-203ENST00000374333 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 BRD7P2-201ENST00000466133 1944 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 OFD1P9Y-201ENST00000417699 1491 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LRCH3Q96II8 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 RPL7-203ENST00000396466 762 ntTSL 3 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 LSM5-205ENST00000409952 687 ntTSL 4 BASIC8.98□□□□□ -0.97
LRCH3Q96II8 AC003080.1-201ENST00000413552 767 ntBASIC8.98□□□□□ -0.97
LRCH3Q96II8 XKRYP4-201ENST00000414395 483 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms