Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.31□□□□□ -1.4
NKX6-1P78426 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
NKX6-1P78426 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
NKX6-1P78426 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.31□□□□□ -1.4
NKX6-1P78426 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.31□□□□□ -1.4
NKX6-1P78426 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC6.31□□□□□ -1.4
NKX6-1P78426 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.31□□□□□ -1.4
NKX6-1P78426 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.31□□□□□ -1.4
NKX6-1P78426 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AL355615.1-201ENST00000406187 641 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.31□□□□□ -1.4
NKX6-1P78426 RPL36P18-201ENST00000419316 318 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AL593856.1-201ENST00000419949 805 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 OR7E117P-201ENST00000422682 1112 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 AC134879.1-201ENST00000426062 394 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 AL160175.1-201ENST00000428124 247 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 AC064862.5-201ENST00000440618 334 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 SRP68P2-201ENST00000456184 254 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 RN7SL149P-201ENST00000465197 281 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 RPS16P9-201ENST00000477220 427 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 RN7SL423P-201ENST00000486202 304 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.31□□□□□ -1.4
NKX6-1P78426 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.31□□□□□ -1.4
NKX6-1P78426 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.31□□□□□ -1.4
NKX6-1P78426 IGLV1-62-201ENST00000518003 441 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 AC010476.1-201ENST00000519111 851 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AP001372.4-201ENST00000524889 472 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 OR4A40P-201ENST00000533878 948 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AC124283.4-201ENST00000581815 456 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 PRELID3BP3-201ENST00000584963 545 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 MTCO2P22-201ENST00000603246 681 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AC021851.1-201ENST00000608537 1082 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 AC097381.3-201ENST00000608962 462 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.31□□□□□ -1.4
NKX6-1P78426 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.31□□□□□ -1.4
NKX6-1P78426 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.31□□□□□ -1.4
NKX6-1P78426 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.31□□□□□ -1.4
NKX6-1P78426 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NKX6-1P78426 AL022323.4-201ENST00000623980 13120 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 AC006116.1-201ENST00000587908 2171 ntBASIC6.31□□□□□ -1.4
NKX6-1P78426 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NKX6-1P78426 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.31□□□□□ -1.4
NKX6-1P78426 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NKX6-1P78426 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.31□□□□□ -1.4
NKX6-1P78426 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 AC027279.4-201ENST00000624371 2072 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 Z93929.1-201ENST00000418200 1475 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 HSPD1P14-201ENST00000432666 1618 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.3□□□□□ -1.4
NKX6-1P78426 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NKX6-1P78426 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NKX6-1P78426 RNU1-56P-201ENST00000391303 164 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 AL136100.1-201ENST00000407696 330 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AC017078.1-201ENST00000416146 368 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.3□□□□□ -1.4
NKX6-1P78426 VN1R42P-201ENST00000424651 344 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.3□□□□□ -1.4
NKX6-1P78426 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NKX6-1P78426 WDR82P2-201ENST00000444540 928 ntBASIC6.3□□□□□ -1.4
NKX6-1P78426 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.3□□□□□ -1.4
NKX6-1P78426 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.3□□□□□ -1.4
NKX6-1P78426 GOT2P2-201ENST00000450663 1251 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms