Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TRIM77BP-201ENST00000524985 1119 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 AC092375.1-201ENST00000550410 637 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 TPRX1P1-201ENST00000557620 319 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 MRPS21P8-201ENST00000569196 235 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 MIR4701-201ENST00000583094 63 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 BUB1P1-201ENST00000603541 607 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 AC073046.2-201ENST00000604756 527 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.4□□□□□ -1.22
CCNA1P78396 AC025171.4-201ENST00000607250 1047 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 AC092681.3-201ENST00000609463 678 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCNA1P78396 AL080312.2-201ENST00000613001 630 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 AC024884.1-201ENST00000620583 399 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 AC034229.6-201ENST00000623704 224 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 SNX18P12-201ENST00000624821 759 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.4□□□□□ -1.22
CCNA1P78396 MIR4302-201ENST00000638058 60 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 AC119674.1-204ENST00000641348 1343 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 AC138915.4-201ENST00000565549 4147 ntBASIC7.4□□□□□ -1.22
CCNA1P78396 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CCNA1P78396 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
CCNA1P78396 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CCNA1P78396 AC015871.3-201ENST00000618835 2261 ntBASIC7.4□□□□□ -1.23
CCNA1P78396 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
CCNA1P78396 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.4□□□□□ -1.23
CCNA1P78396 AC005839.1-201ENST00000624148 3213 ntBASIC7.4□□□□□ -1.23
CCNA1P78396 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
CCNA1P78396 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
CCNA1P78396 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CCNA1P78396 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.39□□□□□ -1.23
CCNA1P78396 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCNA1P78396 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.39□□□□□ -1.23
CCNA1P78396 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCNA1P78396 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
CCNA1P78396 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCNA1P78396 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CCNA1P78396 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CCNA1P78396 AC010329.1-201ENST00000593903 8328 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCNA1P78396 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCNA1P78396 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.39□□□□□ -1.23
CCNA1P78396 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.39□□□□□ -1.23
CCNA1P78396 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
CCNA1P78396 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CCNA1P78396 MTCO1P28-201ENST00000574177 1528 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 AL353743.3-201ENST00000442109 1468 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CCNA1P78396 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.39□□□□□ -1.23
CCNA1P78396 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.39□□□□□ -1.23
CCNA1P78396 RPL12P16-201ENST00000431098 498 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 AC112492.2-201ENST00000432774 1030 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.39□□□□□ -1.23
CCNA1P78396 AC011411.1-201ENST00000509592 876 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 PRMT5P1-201ENST00000514351 598 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 RN7SKP35-201ENST00000517210 151 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.39□□□□□ -1.23
CCNA1P78396 AC092332.1-201ENST00000563684 829 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 AC012146.2-201ENST00000576545 416 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.39□□□□□ -1.23
CCNA1P78396 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.39□□□□□ -1.23
CCNA1P78396 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.39□□□□□ -1.23
CCNA1P78396 AL354718.1-201ENST00000619764 589 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 AC129778.1-202ENST00000623812 261 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 AL591379.1-207ENST00000635982 261 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.39□□□□□ -1.23
CCNA1P78396 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.39□□□□□ -1.23
CCNA1P78396 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCNA1P78396 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.39□□□□□ -1.23
CCNA1P78396 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
CCNA1P78396 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.39□□□□□ -1.23
CCNA1P78396 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCNA1P78396 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.39□□□□□ -1.23
CCNA1P78396 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCNA1P78396 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCNA1P78396 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CCNA1P78396 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.38□□□□□ -1.23
CCNA1P78396 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCNA1P78396 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
CCNA1P78396 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
CCNA1P78396 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCNA1P78396 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCNA1P78396 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CCNA1P78396 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCNA1P78396 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.38□□□□□ -1.23
CCNA1P78396 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.38□□□□□ -1.23
CCNA1P78396 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.38□□□□□ -1.23
CCNA1P78396 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCNA1P78396 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CCNA1P78396 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.38□□□□□ -1.23
CCNA1P78396 AL157884.1-201ENST00000424561 454 ntBASIC7.38□□□□□ -1.23
CCNA1P78396 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.38□□□□□ -1.23
CCNA1P78396 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.38□□□□□ -1.23
CCNA1P78396 SOCS5P1-201ENST00000440415 949 ntBASIC7.38□□□□□ -1.23
CCNA1P78396 AC023194.2-201ENST00000465398 406 ntBASIC7.38□□□□□ -1.23
CCNA1P78396 AC022206.1-201ENST00000495947 347 ntBASIC7.38□□□□□ -1.23
CCNA1P78396 OR7E99P-201ENST00000505750 922 ntBASIC7.38□□□□□ -1.23
CCNA1P78396 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.38□□□□□ -1.23
CCNA1P78396 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms