Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.09□□□□□ -1.27
VCPP55072 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.09□□□□□ -1.27
VCPP55072 AC020914.7-201ENST00000594477 545 ntBASIC7.09□□□□□ -1.27
VCPP55072 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.09□□□□□ -1.27
VCPP55072 AL589765.6-201ENST00000601909 549 ntBASIC7.09□□□□□ -1.27
VCPP55072 SMIM12P1-201ENST00000603004 274 ntBASIC7.09□□□□□ -1.27
VCPP55072 AC007255.2-201ENST00000604053 631 ntBASIC7.09□□□□□ -1.27
VCPP55072 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.09□□□□□ -1.27
VCPP55072 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.09□□□□□ -1.27
VCPP55072 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.09□□□□□ -1.27
VCPP55072 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.09□□□□□ -1.27
VCPP55072 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.09□□□□□ -1.27
VCPP55072 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.09□□□□□ -1.27
VCPP55072 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.09□□□□□ -1.27
VCPP55072 AC005034.3-201ENST00000604845 1747 ntBASIC7.09□□□□□ -1.27
VCPP55072 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VCPP55072 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.09□□□□□ -1.27
VCPP55072 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
VCPP55072 AC096992.2-201ENST00000609553 1684 ntBASIC7.09□□□□□ -1.27
VCPP55072 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
VCPP55072 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.08□□□□□ -1.28
VCPP55072 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VCPP55072 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VCPP55072 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VCPP55072 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VCPP55072 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VCPP55072 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
VCPP55072 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.08□□□□□ -1.28
VCPP55072 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VCPP55072 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VCPP55072 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
VCPP55072 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
VCPP55072 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VCPP55072 RNA5SP65-201ENST00000363166 119 ntBASIC7.08□□□□□ -1.28
VCPP55072 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
VCPP55072 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
VCPP55072 AL590635.1-201ENST00000406314 586 ntBASIC7.08□□□□□ -1.28
VCPP55072 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.08□□□□□ -1.28
VCPP55072 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.08□□□□□ -1.28
VCPP55072 AC104843.2-201ENST00000427666 297 ntBASIC7.08□□□□□ -1.28
VCPP55072 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
VCPP55072 AMYP1-201ENST00000440059 1023 ntBASIC7.08□□□□□ -1.28
VCPP55072 CRYGGP-201ENST00000443337 145 ntBASIC7.08□□□□□ -1.28
VCPP55072 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.08□□□□□ -1.28
VCPP55072 RN7SL552P-201ENST00000462094 276 ntBASIC7.08□□□□□ -1.28
VCPP55072 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.08□□□□□ -1.28
VCPP55072 AC117395.1-201ENST00000487390 403 ntBASIC7.08□□□□□ -1.28
VCPP55072 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.08□□□□□ -1.28
VCPP55072 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.08□□□□□ -1.28
VCPP55072 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.08□□□□□ -1.28
VCPP55072 AC090826.1-203ENST00000569235 490 ntBASIC7.08□□□□□ -1.28
VCPP55072 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.08□□□□□ -1.28
VCPP55072 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.08□□□□□ -1.28
VCPP55072 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.08□□□□□ -1.28
VCPP55072 AC114546.4-201ENST00000624413 369 ntBASIC7.08□□□□□ -1.28
VCPP55072 AC017037.4-201ENST00000624526 826 ntBASIC7.08□□□□□ -1.28
VCPP55072 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.08□□□□□ -1.28
VCPP55072 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VCPP55072 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
VCPP55072 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.08□□□□□ -1.28
VCPP55072 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.08□□□□□ -1.28
VCPP55072 RARSP1-201ENST00000542842 1418 ntBASIC7.08□□□□□ -1.28
VCPP55072 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
VCPP55072 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
VCPP55072 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.07□□□□□ -1.28
VCPP55072 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VCPP55072 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VCPP55072 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC7.07□□□□□ -1.28
VCPP55072 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.07□□□□□ -1.28
VCPP55072 AC112243.1-201ENST00000623949 3851 ntBASIC7.07□□□□□ -1.28
VCPP55072 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
VCPP55072 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.07□□□□□ -1.28
VCPP55072 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VCPP55072 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
VCPP55072 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
VCPP55072 RNA5SP77-201ENST00000365394 120 ntBASIC7.07□□□□□ -1.28
VCPP55072 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.07□□□□□ -1.28
VCPP55072 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VCPP55072 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
VCPP55072 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
VCPP55072 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.07□□□□□ -1.28
VCPP55072 CHEK2P5-201ENST00000423877 246 ntBASIC7.07□□□□□ -1.28
VCPP55072 GPN3P1-201ENST00000423883 535 ntBASIC7.07□□□□□ -1.28
VCPP55072 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
VCPP55072 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.07□□□□□ -1.28
VCPP55072 HSPE1P27-201ENST00000430808 296 ntBASIC7.07□□□□□ -1.28
VCPP55072 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.07□□□□□ -1.28
VCPP55072 RPL23AP28-201ENST00000448062 470 ntBASIC7.07□□□□□ -1.28
VCPP55072 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VCPP55072 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VCPP55072 RN7SL561P-201ENST00000488553 281 ntBASIC7.07□□□□□ -1.28
VCPP55072 RNA5SP278-201ENST00000517055 102 ntBASIC7.07□□□□□ -1.28
VCPP55072 AC122713.1-201ENST00000518368 1015 ntBASIC7.07□□□□□ -1.28
VCPP55072 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.07□□□□□ -1.28
VCPP55072 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.07□□□□□ -1.28
VCPP55072 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.07□□□□□ -1.28
VCPP55072 RN7SL404P-201ENST00000582421 281 ntBASIC7.07□□□□□ -1.28
VCPP55072 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.07□□□□□ -1.28
VCPP55072 AC008521.2-201ENST00000591021 259 ntBASIC7.07□□□□□ -1.28
VCPP55072 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms