Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SNORA70J-201ENST00000384182 135 ntBASIC6.54□□□□□ -1.36
LIMK2P53671 VIM2P-201ENST00000402383 1294 ntBASIC6.54□□□□□ -1.36
LIMK2P53671 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMK2P53671 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMK2P53671 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMK2P53671 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK2P53671 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMK2P53671 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.54□□□□□ -1.36
LIMK2P53671 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.54□□□□□ -1.36
LIMK2P53671 AC073916.1-201ENST00000545095 130 ntBASIC6.54□□□□□ -1.36
LIMK2P53671 AC005519.1-201ENST00000554490 601 ntBASIC6.54□□□□□ -1.36
LIMK2P53671 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMK2P53671 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMK2P53671 MT1CP-201ENST00000567054 174 ntBASIC6.54□□□□□ -1.36
LIMK2P53671 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK2P53671 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMK2P53671 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.54□□□□□ -1.36
LIMK2P53671 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMK2P53671 AL008582.1-201ENST00000609612 442 ntBASIC6.54□□□□□ -1.36
LIMK2P53671 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMK2P53671 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
LIMK2P53671 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK2P53671 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK2P53671 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK2P53671 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMK2P53671 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.54□□□□□ -1.36
LIMK2P53671 AC119674.1-213ENST00000641177 1386 ntBASIC6.54□□□□□ -1.36
LIMK2P53671 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK2P53671 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK2P53671 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK2P53671 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.54□□□□□ -1.36
LIMK2P53671 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
LIMK2P53671 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMK2P53671 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
LIMK2P53671 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK2P53671 AL157831.2-201ENST00000564681 3095 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
LIMK2P53671 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 PSMC1P6-201ENST00000477233 1319 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK2P53671 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
LIMK2P53671 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.53□□□□□ -1.36
LIMK2P53671 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
LIMK2P53671 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
LIMK2P53671 RNA5SP321-201ENST00000362722 111 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 RN7SKP171-201ENST00000364417 303 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 RNA5SP140-201ENST00000364524 92 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 MIR621-201ENST00000384919 96 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 RNA5SP115-201ENST00000411160 107 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 AL359092.1-201ENST00000417156 265 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 AC007568.1-201ENST00000422912 471 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK2P53671 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK2P53671 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.53□□□□□ -1.36
LIMK2P53671 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 LINC00328-2P-201ENST00000436585 219 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.53□□□□□ -1.36
LIMK2P53671 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK2P53671 AC234771.2-201ENST00000445718 597 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.53□□□□□ -1.36
LIMK2P53671 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.53□□□□□ -1.36
LIMK2P53671 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
LIMK2P53671 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK2P53671 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.53□□□□□ -1.36
LIMK2P53671 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.53□□□□□ -1.36
LIMK2P53671 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.53□□□□□ -1.36
LIMK2P53671 AC121758.1-202ENST00000556917 658 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.53□□□□□ -1.36
LIMK2P53671 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.53□□□□□ -1.36
LIMK2P53671 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.53□□□□□ -1.36
LIMK2P53671 AC091133.5-201ENST00000603088 301 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 AP001264.1-201ENST00000620602 703 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 AL035425.4-201ENST00000624509 1063 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.53□□□□□ -1.36
LIMK2P53671 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.53□□□□□ -1.36
LIMK2P53671 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
LIMK2P53671 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK2P53671 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
LIMK2P53671 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK2P53671 RPS2P45-201ENST00000469997 2057 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 AC105235.1-201ENST00000623208 1816 ntBASIC6.53□□□□□ -1.36
LIMK2P53671 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK2P53671 XKRY2-202ENST00000623874 1581 ntBASIC6.52□□□□□ -1.36
LIMK2P53671 XKRY-202ENST00000624960 1581 ntBASIC6.52□□□□□ -1.36
LIMK2P53671 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
LIMK2P53671 AL117378.2-201ENST00000622916 1337 ntBASIC6.52□□□□□ -1.37
LIMK2P53671 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
LIMK2P53671 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
LIMK2P53671 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms