Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HTTP42858 RNA5SP87-201ENST00000384155 118 ntBASIC6.67□□□□□ -1.34
HTTP42858 AL390774.1-201ENST00000411924 246 ntBASIC6.67□□□□□ -1.34
HTTP42858 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 AC091153.1-201ENST00000466297 402 ntBASIC6.67□□□□□ -1.34
HTTP42858 OR5AZ1P-201ENST00000527448 943 ntBASIC6.67□□□□□ -1.34
HTTP42858 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.67□□□□□ -1.34
HTTP42858 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 AC083809.1-201ENST00000615051 472 ntBASIC6.67□□□□□ -1.34
HTTP42858 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HTTP42858 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
HTTP42858 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
HTTP42858 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC6.67□□□□□ -1.34
HTTP42858 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 AC024651.2-201ENST00000562480 2098 ntBASIC6.67□□□□□ -1.34
HTTP42858 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.67□□□□□ -1.34
HTTP42858 AC126120.1-201ENST00000431082 470 ntBASIC6.67□□□□□ -1.34
HTTP42858 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 AC022215.1-201ENST00000481770 362 ntBASIC6.67□□□□□ -1.34
HTTP42858 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.67□□□□□ -1.34
HTTP42858 PTTG3P-201ENST00000521862 606 ntBASIC6.67□□□□□ -1.34
HTTP42858 AC004825.1-201ENST00000555068 586 ntBASIC6.67□□□□□ -1.34
HTTP42858 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.67□□□□□ -1.34
HTTP42858 OR11H2-202ENST00000641517 1085 ntBASIC6.67□□□□□ -1.34
HTTP42858 AL035555.1-201ENST00000404462 1790 ntBASIC6.67□□□□□ -1.34
HTTP42858 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 LINC01694-202ENST00000441095 6721 ntTSL 3 BASIC6.67□□□□□ -1.34
HTTP42858 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.67□□□□□ -1.34
HTTP42858 CACNA1E-203ENST00000360108 6970 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 SAR1B-201ENST00000402673 6682 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.67□□□□□ -1.34
HTTP42858 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.67□□□□□ -1.34
HTTP42858 AC126755.2-208ENST00000327792 462 ntBASIC6.67□□□□□ -1.34
HTTP42858 AC138969.1-213ENST00000331436 462 ntBASIC6.67□□□□□ -1.34
HTTP42858 MIR199B-201ENST00000384849 110 ntBASIC6.67□□□□□ -1.34
HTTP42858 SLC35E1P1-201ENST00000419313 864 ntBASIC6.67□□□□□ -1.34
HTTP42858 RBMY2QP-201ENST00000429799 1147 ntBASIC6.67□□□□□ -1.34
HTTP42858 AC009237.1-201ENST00000442127 744 ntBASIC6.67□□□□□ -1.34
HTTP42858 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.67□□□□□ -1.34
HTTP42858 AC092375.1-201ENST00000550410 637 ntBASIC6.67□□□□□ -1.34
HTTP42858 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 AC119403.2-201ENST00000590960 598 ntBASIC6.67□□□□□ -1.34
HTTP42858 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
HTTP42858 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC6.67□□□□□ -1.34
HTTP42858 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 DPCR1-203ENST00000636043 5587 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
HTTP42858 WDR36-206ENST00000612402 6592 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.66□□□□□ -1.34
HTTP42858 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
HTTP42858 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
HTTP42858 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
HTTP42858 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.66□□□□□ -1.34
HTTP42858 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.66□□□□□ -1.34
HTTP42858 RN7SL459P-201ENST00000481078 302 ntBASIC6.66□□□□□ -1.34
HTTP42858 OR7E157P-201ENST00000494376 911 ntBASIC6.66□□□□□ -1.34
HTTP42858 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.66□□□□□ -1.34
HTTP42858 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.66□□□□□ -1.34
HTTP42858 AC087269.2-201ENST00000641764 975 ntBASIC6.66□□□□□ -1.34
HTTP42858 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.66□□□□□ -1.34
HTTP42858 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
HTTP42858 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.66□□□□□ -1.34
HTTP42858 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.66□□□□□ -1.34
HTTP42858 AC137056.2-201ENST00000624055 1958 ntBASIC6.66□□□□□ -1.34
HTTP42858 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.66□□□□□ -1.34
HTTP42858 LAMA3-201ENST00000269217 5671 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
HTTP42858 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
HTTP42858 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.66□□□□□ -1.34
HTTP42858 AC108075.1-201ENST00000424692 529 ntBASIC6.66□□□□□ -1.34
HTTP42858 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms