Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.09□□□□□ -1.43
SCN2BO60939 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SCN2BO60939 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SCN2BO60939 CCAT2-201ENST00000630920 1752 ntBASIC6.09□□□□□ -1.43
SCN2BO60939 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SCN2BO60939 AL449283.1-201ENST00000602631 3403 ntBASIC6.09□□□□□ -1.43
SCN2BO60939 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SCN2BO60939 NPM1P14-201ENST00000343743 866 ntBASIC6.09□□□□□ -1.43
SCN2BO60939 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SCN2BO60939 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SCN2BO60939 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.09□□□□□ -1.43
SCN2BO60939 AL356133.1-201ENST00000444762 372 ntBASIC6.09□□□□□ -1.43
SCN2BO60939 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.09□□□□□ -1.43
SCN2BO60939 VN1R38P-201ENST00000450265 887 ntBASIC6.09□□□□□ -1.43
SCN2BO60939 CCNJP1-201ENST00000450600 1149 ntBASIC6.09□□□□□ -1.43
SCN2BO60939 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SCN2BO60939 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.09□□□□□ -1.43
SCN2BO60939 TREML3P-201ENST00000457327 501 ntBASIC6.09□□□□□ -1.43
SCN2BO60939 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.09□□□□□ -1.43
SCN2BO60939 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.09□□□□□ -1.43
SCN2BO60939 AP001804.1-201ENST00000526868 919 ntBASIC6.09□□□□□ -1.43
SCN2BO60939 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.09□□□□□ -1.43
SCN2BO60939 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.09□□□□□ -1.43
SCN2BO60939 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.09□□□□□ -1.43
SCN2BO60939 RPL29P33-201ENST00000587474 316 ntBASIC6.09□□□□□ -1.43
SCN2BO60939 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.09□□□□□ -1.43
SCN2BO60939 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.09□□□□□ -1.43
SCN2BO60939 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.09□□□□□ -1.43
SCN2BO60939 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.09□□□□□ -1.43
SCN2BO60939 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.09□□□□□ -1.43
SCN2BO60939 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.09□□□□□ -1.43
SCN2BO60939 AC022726.2-201ENST00000634673 547 ntBASIC6.09□□□□□ -1.43
SCN2BO60939 AC090220.1-201ENST00000593078 1699 ntBASIC6.09□□□□□ -1.43
SCN2BO60939 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.09□□□□□ -1.43
SCN2BO60939 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SCN2BO60939 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.09□□□□□ -1.43
SCN2BO60939 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SCN2BO60939 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SCN2BO60939 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SCN2BO60939 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SCN2BO60939 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN2BO60939 AC010132.4-201ENST00000569883 1368 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.08□□□□□ -1.44
SCN2BO60939 HSPD1P8-201ENST00000400121 1658 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN2BO60939 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN2BO60939 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 OR7A2P-201ENST00000304105 930 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.08□□□□□ -1.44
SCN2BO60939 U3.52-201ENST00000384034 216 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 AL391419.1-201ENST00000398901 1275 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN2BO60939 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN2BO60939 RPL3P11-201ENST00000434028 1146 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN2BO60939 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN2BO60939 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN2BO60939 AL022237.1-201ENST00000446663 358 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 SLAMF6P1-201ENST00000451067 602 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 EIF3LP2-201ENST00000457262 807 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 AC022206.1-201ENST00000495947 347 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SCN2BO60939 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.08□□□□□ -1.44
SCN2BO60939 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN2BO60939 IGKV1D-22-201ENST00000518953 324 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 AC130366.1-201ENST00000526505 1192 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 OR4A40P-201ENST00000533878 948 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN2BO60939 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN2BO60939 AC089984.3-201ENST00000552838 363 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.08□□□□□ -1.44
SCN2BO60939 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.08□□□□□ -1.44
SCN2BO60939 AC090616.1-201ENST00000583895 447 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.08□□□□□ -1.44
SCN2BO60939 U1.41-201ENST00000617626 165 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
SCN2BO60939 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SCN2BO60939 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
SCN2BO60939 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SCN2BO60939 AC005261.2-201ENST00000593427 4258 ntBASIC6.08□□□□□ -1.44
SCN2BO60939 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCN2BO60939 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCN2BO60939 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms