Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6□□□□□ -1.45
NPIPA3F8WFD2 OR7E22P-201ENST00000478335 1035 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 AC005017.1-201ENST00000482002 490 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 AC093870.1-201ENST00000506837 213 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6□□□□□ -1.45
NPIPA3F8WFD2 Vault.2-201ENST00000516519 98 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6□□□□□ -1.45
NPIPA3F8WFD2 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6□□□□□ -1.45
NPIPA3F8WFD2 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6□□□□□ -1.45
NPIPA3F8WFD2 AC092718.4-201ENST00000566639 716 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6□□□□□ -1.45
NPIPA3F8WFD2 RN7SL230P-201ENST00000580835 303 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6□□□□□ -1.45
NPIPA3F8WFD2 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6□□□□□ -1.45
NPIPA3F8WFD2 AL589743.6-201ENST00000611025 117 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 AC022960.2-201ENST00000616300 666 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 AL683826.1-201ENST00000624104 627 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 SNX18P10-201ENST00000625014 519 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6□□□□□ -1.45
NPIPA3F8WFD2 AC096992.2-201ENST00000609553 1684 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NPIPA3F8WFD2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
NPIPA3F8WFD2 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6□□□□□ -1.45
NPIPA3F8WFD2 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NPIPA3F8WFD2 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6□□□□□ -1.45
NPIPA3F8WFD2 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6□□□□□ -1.45
NPIPA3F8WFD2 SMG1P5-202ENST00000529428 4219 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 SMG1P2-201ENST00000566127 4221 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 MROH3P-201ENST00000435735 2676 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 AC083806.2-201ENST00000617795 2685 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NPIPA3F8WFD2 MAPK10-383ENST00000642032 3390 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 AL591848.4-201ENST00000567832 3472 ntBASIC6□□□□□ -1.45
NPIPA3F8WFD2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6□□□□□ -1.45
NPIPA3F8WFD2 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 MIPEPP2-201ENST00000422560 1819 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 PRELID1P1-201ENST00000403549 660 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 RN7SKP86-201ENST00000410454 332 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 RN7SKP296-201ENST00000411185 341 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 GAPDHP33-201ENST00000443168 1013 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 MTND4LP12-201ENST00000448237 295 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 AC104339.1-201ENST00000465478 348 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 RPL5P16-201ENST00000471467 790 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 AC122718.2-201ENST00000505325 591 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 OR52H2P-201ENST00000514607 902 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 RNA5SP116-201ENST00000516132 98 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 AC009729.1-201ENST00000548873 1133 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 AC020765.1-201ENST00000604296 328 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 PSMC1P6-201ENST00000477233 1319 ntBASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NPIPA3F8WFD2 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 RNU1-65P-201ENST00000363919 148 ntBASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 YWHAZP4-201ENST00000392459 708 ntBASIC5.98□□□□□ -1.45
NPIPA3F8WFD2 PSMA6P1-201ENST00000400275 741 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms