Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AL356320.2-201ENST00000417263 507 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 RPF2P1-201ENST00000424137 906 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 NIP7P1-201ENST00000433227 512 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 ATP5LP4-201ENST00000434169 307 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 NANOGP2-201ENST00000435391 727 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AL161722.1-201ENST00000446972 1032 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC011611.6-201ENST00000547483 255 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC009094.1-201ENST00000564443 426 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AP006587.6-201ENST00000582128 1091 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC091057.2-201ENST00000602594 792 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AL035417.2-201ENST00000603887 796 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC006335.3-201ENST00000613408 292 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AL451054.1-201ENST00000621770 772 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AP003497.2-201ENST00000624220 967 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AL354854.1-201ENST00000455940 1363 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 MFSD8-227ENST00000641393 4069 ntBASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
TRAIPQ9BWF2 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC104078.1-201ENST00000499292 1448 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 TMSB4XP2-201ENST00000335179 210 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 RN7SKP257-201ENST00000364525 309 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 MIR137-201ENST00000385223 102 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AL590143.1-201ENST00000405071 138 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 GAS8-AS1-201ENST00000408886 435 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC092745.2-202ENST00000411880 369 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 FDPSP6-201ENST00000425091 512 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 C1DP1-201ENST00000426049 402 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 CENPN-204ENST00000428963 971 ntTSL 2 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AL031736.1-201ENST00000449688 618 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC008620.1-201ENST00000468453 592 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC091959.2-201ENST00000477363 321 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 MTND2P14-201ENST00000482139 351 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 CREM-242ENST00000490511 469 ntTSL 2 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC122714.1-201ENST00000502510 459 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC093890.1-201ENST00000502554 540 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC104123.1-203ENST00000513158 575 ntTSL 3 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 RN7SKP242-201ENST00000515967 289 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 SDHCP4-201ENST00000532834 510 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms