Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC010624.4-201ENST00000597606 1351 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 OR10D1P-201ENST00000355343 936 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 RNU4-81P-201ENST00000363561 144 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 RAN-201ENST00000392367 780 ntTSL 5 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 RPL23AP17-201ENST00000401064 499 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 TYMSP1-201ENST00000407851 869 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 RN7SKP296-201ENST00000411185 341 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 SMARCE1P1-201ENST00000417747 1186 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 RPS7P12-201ENST00000422385 582 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC093107.1-201ENST00000422772 609 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 FTLP17-201ENST00000432567 525 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 GAPDHP53-201ENST00000458397 924 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 RPSAP48-201ENST00000466509 889 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 RPL7AP56-201ENST00000476420 791 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC117383.2-201ENST00000514722 322 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 RN7SL371P-201ENST00000578099 267 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 RN7SL25P-201ENST00000583862 260 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC090241.1-201ENST00000587732 621 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC092032.1-201ENST00000603090 165 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AL049840.6-201ENST00000604583 345 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC012640.3-201ENST00000607847 430 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC087893.2-201ENST00000623272 255 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC133485.6-201ENST00000624045 688 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AL162377.2-201ENST00000624532 337 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 OR5AU1-204ENST00000641822 1197 ntBASIC4.83□□□□□ -1.64
AP1S3Q96PC3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 LINC02019-201ENST00000608605 2060 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AC105749.1-201ENST00000631338 2008 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 RACGAP1P-201ENST00000550663 1879 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 SNORA70.3-201ENST00000365075 132 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 U3.14-201ENST00000365363 227 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AL035467.1-201ENST00000403583 686 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AL157698.1-201ENST00000415190 1011 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AC017078.1-201ENST00000416146 368 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 SNRPEP5-201ENST00000425442 278 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 KRT18P53-201ENST00000431919 117 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 RPL7P14-201ENST00000449851 741 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC4.82□□□□□ -1.64
AP1S3Q96PC3 SCDP1-201ENST00000455244 1081 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 Z83838.1-202ENST00000456225 839 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 RN7SL263P-201ENST00000467969 290 ntBASIC4.82□□□□□ -1.64
AP1S3Q96PC3 AL928654.1-201ENST00000476081 354 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms