Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 OR9L1P-201ENST00000529493 933 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AC026951.2-201ENST00000613847 241 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 PDZK1P1-202ENST00000425209 1350 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 ERMN-202ENST00000409216 746 ntTSL 4 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 FMO7P-201ENST00000436045 768 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 ACA64.1-201ENST00000459171 127 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AL359704.2-201ENST00000604335 521 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 MIR375-201ENST00000362103 64 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 CNOT7P2-201ENST00000441051 832 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 RN7SL329P-201ENST00000467740 299 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AC253576.1-201ENST00000511645 1156 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 Y_RNA.710-201ENST00000516975 110 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 IGKV1D-22-201ENST00000518953 324 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AL591767.3-201ENST00000554632 525 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AL137246.2-201ENST00000613439 662 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 AC183089.2-201ENST00000637931 916 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 CASC15-203ENST00000605917 4461 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 NCOA4P3-201ENST00000513203 1877 ntBASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
ALMS1Q8TCU4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 ERG-210ENST00000442448 5034 ntTSL 5 BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 RNA5SP132-201ENST00000364725 118 ntBASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 OR5W1P-201ENST00000423705 938 ntBASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 FO393422.1-201ENST00000603908 708 ntBASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 AC007683.2-201ENST00000624681 714 ntBASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 ZNF83-211ENST00000597597 4442 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 AC027088.4-201ENST00000611559 1947 ntBASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 TRPS1-201ENST00000220888 5480 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
ALMS1Q8TCU4 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AP005139.1-201ENST00000580702 1647 ntBASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ALMS1Q8TCU4 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms