Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.69□□□□□ -1.18
SHKBP1Q8TBC3 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SHKBP1Q8TBC3 AC002090.1-201ENST00000625000 2138 ntBASIC7.69□□□□□ -1.18
SHKBP1Q8TBC3 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHKBP1Q8TBC3 AC104454.1-201ENST00000421341 1401 ntBASIC7.69□□□□□ -1.18
SHKBP1Q8TBC3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHKBP1Q8TBC3 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHKBP1Q8TBC3 AC068860.1-201ENST00000623701 3736 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AC093616.1-201ENST00000427434 2095 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 RPL5P8-201ENST00000396820 815 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 RPS3AP26-201ENST00000398259 784 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 LYPLA1P3-201ENST00000402650 695 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 MTND4P24-201ENST00000424002 397 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 FDPSP1-201ENST00000424976 1071 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 PA2G4P1-201ENST00000442248 1197 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 CYCSP44-201ENST00000448560 313 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AC008565.1-201ENST00000509046 885 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 RPL12P22-201ENST00000519073 490 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 PHBP2-201ENST00000532859 806 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 MIR4800-201ENST00000537353 80 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AGGF1P4-201ENST00000568249 801 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 STX8-209ENST00000574431 731 ntTSL 3 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 AC024941.1-201ENST00000612250 334 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 MTND4P31-201ENST00000425607 1343 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 MRPS17P1-201ENST00000596009 3130 ntBASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.68□□□□□ -1.18
SHKBP1Q8TBC3 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 OGFOD1P1-201ENST00000447552 1592 ntBASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 Y_RNA.77-201ENST00000362962 107 ntBASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 SNORA70.8-201ENST00000384231 136 ntBASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 MIR575-201ENST00000385013 94 ntBASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 AL355615.1-201ENST00000406187 641 ntBASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 SNORA3.1-201ENST00000408166 111 ntBASIC7.67□□□□□ -1.18
SHKBP1Q8TBC3 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms