Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CCDC71LQ8N9Z2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AP001284.1-201ENST00000528393 2118 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AC116158.1-201ENST00000560231 2129 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 RN7SKP77-201ENST00000363261 353 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 MIR128-2-201ENST00000384893 84 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AL035467.1-201ENST00000403583 686 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 RN7SKP236-201ENST00000410635 284 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AL929472.1-201ENST00000417484 429 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 CYP4F30P-202ENST00000420048 405 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 VDAC2P3-201ENST00000430995 828 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 RPL26P30-201ENST00000453533 435 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 SRP68P2-201ENST00000456184 254 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 RN7SL263P-201ENST00000467969 290 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 SLC25A51P1-201ENST00000468432 871 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 RN7SL390P-201ENST00000470634 284 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AC005017.1-201ENST00000482002 490 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AC090142.2-201ENST00000483263 416 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AL390198.2-201ENST00000510553 222 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AC106800.3-201ENST00000511389 308 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AL132640.1-201ENST00000559594 619 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 ANP32BP1-202ENST00000568553 737 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 RN7SL689P-201ENST00000577215 297 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AL589765.5-201ENST00000596133 515 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 MIR665-201ENST00000635949 72 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 AC125336.1-201ENST00000508893 2827 ntBASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC71LQ8N9Z2 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 SNORA30B-201ENST00000365319 129 ntBASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 UBBP1-201ENST00000392399 473 ntBASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 AL359694.1-201ENST00000403247 604 ntBASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 U3.43-201ENST00000410734 213 ntBASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 RPS26P38-201ENST00000414476 348 ntBASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 AL359092.1-201ENST00000417156 265 ntBASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 AC109638.1-201ENST00000417406 326 ntBASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC71LQ8N9Z2 PRKAR1AP1-201ENST00000441422 1162 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms