Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 OR8F1P-201ENST00000425243 930 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 HNRNPA1P29-201ENST00000426409 879 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AF274573.1-201ENST00000430535 494 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC069154.1-201ENST00000432914 542 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 RPL7P29-201ENST00000437151 728 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 LARP1BP3-201ENST00000437229 869 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 SNRPEP8-201ENST00000442866 260 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 VN1R10P-201ENST00000447106 875 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AL034418.1-201ENST00000448675 860 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 PCMTD1P3-201ENST00000451824 472 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 DNAJC19P8-201ENST00000452887 259 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AL391825.1-202ENST00000458136 741 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 PSMC1P13-201ENST00000458195 985 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 RN7SL749P-201ENST00000460421 290 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 RNU6-416P-201ENST00000516265 103 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 CDC42P3-201ENST00000518493 633 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 OR5AK1P-201ENST00000524837 922 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC079031.2-201ENST00000537742 615 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC025280.1-201ENST00000562393 260 ntTSL 2 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 PCMTD1P2-201ENST00000565017 355 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 TTN-AS1-218ENST00000586452 828 ntTSL 5 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 FAM95B1-209ENST00000590863 789 ntTSL 2 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 HMGN2P46-208ENST00000598619 490 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AL121830.1-203ENST00000598694 701 ntTSL 5 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC015871.2-201ENST00000603605 948 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 FAM238B-204ENST00000612040 423 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC072046.2-201ENST00000618366 268 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC010223.1-201ENST00000625092 279 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AL583852.1-201ENST00000635018 572 ntTSL 4 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC099654.5-201ENST00000636479 350 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 AC099654.10-201ENST00000640395 161 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 PHF6-204ENST00000370803 4489 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 MAPK10-313ENST00000641405 2469 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 ST7-213ENST00000432298 1956 ntTSL 2 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 DLD-205ENST00000440410 1993 ntTSL 2 BASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.79□□□□□ -1.16
DEPDC4Q8N2C3 EIF3EP1-201ENST00000433978 1316 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 KYNUP3-201ENST00000574386 1341 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC009948.5-201ENST00000624360 4406 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AL365475.1-201ENST00000565135 1949 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 ASAP1-IT2-201ENST00000626977 2031 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 PAQR5-205ENST00000561153 2347 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 RPL11P4-201ENST00000332269 436 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 ZDHHC11B-201ENST00000382776 1116 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 Y_RNA.408-201ENST00000383987 102 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 RNU5A-6P-201ENST00000384136 116 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 MIR185-201ENST00000385288 82 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 RNA5SP498-201ENST00000411342 120 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AL049734.1-201ENST00000422384 608 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC073346.1-202ENST00000430610 544 ntTSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 DAB1-AS1-203ENST00000432897 656 ntTSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 B3GNT2P1-201ENST00000434960 952 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC091808.1-201ENST00000438867 786 ntTSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 RPSAP40-201ENST00000442343 891 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms