Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC027559.1-201ENST00000636288 271 ntBASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC50Q8IVM0 AC119674.1-213ENST00000641177 1386 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AC095038.1-201ENST00000429248 1591 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 HSPD1P1-201ENST00000503199 1726 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 RNA5SP355-201ENST00000365317 135 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 LCN1P2-201ENST00000372030 223 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AL360271.1-201ENST00000395679 510 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AL451061.1-201ENST00000407887 862 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 RN7SKP117-201ENST00000410175 264 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AL929472.1-201ENST00000417484 429 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AC009303.1-201ENST00000426307 352 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AC097721.1-201ENST00000427150 1253 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AL592114.2-201ENST00000440142 532 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 RBMY2EP-202ENST00000456360 940 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 UOX-201ENST00000471089 899 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 SNRPCP3-201ENST00000474888 476 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AP005639.1-201ENST00000526939 192 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AC127071.2-201ENST00000623293 527 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AC009120.7-201ENST00000623452 780 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 AC011455.2-201ENST00000599320 3336 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 NLRP3P1-201ENST00000622303 1785 ntBASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
CCDC50Q8IVM0 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 AC004656.1-201ENST00000568479 4951 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 WDR95P-201ENST00000425638 1542 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 NEK2P2-201ENST00000438441 1338 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 PSMC1P4-201ENST00000515236 1327 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 RNA5SP350-201ENST00000363298 111 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 RPL18AP14-201ENST00000417685 526 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 VN1R38P-201ENST00000450265 887 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 AC099340.1-201ENST00000475247 599 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 AC139713.1-202ENST00000512366 460 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 AC093878.1-201ENST00000515630 432 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 RBMS2P1-201ENST00000525031 1226 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 FCGR1CP-201ENST00000579737 1127 ntBASIC6.81□□□□□ -1.32
CCDC50Q8IVM0 AC091133.5-201ENST00000603088 301 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms