Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 AC007485.2-201ENST00000623493 1667 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
FOXG1P55316 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
FOXG1P55316 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXG1P55316 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXG1P55316 AC128677.1-201ENST00000436016 442 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 MTND4P15-201ENST00000437913 1033 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXG1P55316 GAPDHP37-201ENST00000442317 968 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.83□□□□□ -1.48
FOXG1P55316 AC015908.1-201ENST00000478739 476 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 AC022415.1-202ENST00000486612 523 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXG1P55316 AC114324.2-202ENST00000503812 134 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXG1P55316 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXG1P55316 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXG1P55316 AC022826.1-201ENST00000519383 805 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXG1P55316 MTND5P21-201ENST00000531961 522 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 BTG1P1-201ENST00000540396 508 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 CR383656.14-201ENST00000551951 406 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXG1P55316 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC5.83□□□□□ -1.48
FOXG1P55316 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.83□□□□□ -1.48
FOXG1P55316 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 RN7SL199P-201ENST00000578752 281 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 RN7SL656P-201ENST00000579044 281 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 RN7SL404P-201ENST00000582421 281 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXG1P55316 AC006116.5-201ENST00000591936 559 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 AL049840.5-201ENST00000602827 552 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 KATNBL1P1-201ENST00000605192 748 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.83□□□□□ -1.48
FOXG1P55316 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 AC107905.1-201ENST00000616204 426 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 AC120349.3-201ENST00000624377 529 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC5.83□□□□□ -1.48
FOXG1P55316 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXG1P55316 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 AC105114.1-201ENST00000624795 1862 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
FOXG1P55316 MTCO1P25-201ENST00000414449 1799 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXG1P55316 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
FOXG1P55316 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXG1P55316 AC119674.1-204ENST00000641348 1343 ntBASIC5.82□□□□□ -1.48
FOXG1P55316 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 MIR551B-201ENST00000384984 96 ntBASIC5.82□□□□□ -1.48
FOXG1P55316 AL034417.1-201ENST00000399343 800 ntBASIC5.82□□□□□ -1.48
FOXG1P55316 AC017035.1-201ENST00000411999 1115 ntBASIC5.82□□□□□ -1.48
FOXG1P55316 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.82□□□□□ -1.48
FOXG1P55316 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXG1P55316 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXG1P55316 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.82□□□□□ -1.48
FOXG1P55316 RPL17P35-201ENST00000432217 549 ntBASIC5.82□□□□□ -1.48
FOXG1P55316 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXG1P55316 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
FOXG1P55316 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXG1P55316 AL356121.1-201ENST00000442911 156 ntBASIC5.82□□□□□ -1.48
FOXG1P55316 UBBP5-201ENST00000446970 266 ntBASIC5.82□□□□□ -1.48
FOXG1P55316 RBMY3AP-201ENST00000449381 1145 ntBASIC5.82□□□□□ -1.48
FOXG1P55316 CCNJP1-201ENST00000450600 1149 ntBASIC5.82□□□□□ -1.48
FOXG1P55316 RARRES2P3-201ENST00000457739 473 ntBASIC5.82□□□□□ -1.48
FOXG1P55316 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.82□□□□□ -1.48
FOXG1P55316 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
FOXG1P55316 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXG1P55316 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXG1P55316 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms