Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.16□□□□□ -1.1
COL15A1P39059 AC020765.1-201ENST00000604296 328 ntBASIC8.16□□□□□ -1.1
COL15A1P39059 SNORA74.4-201ENST00000607595 199 ntBASIC8.16□□□□□ -1.1
COL15A1P39059 AC103703.1-201ENST00000634783 663 ntBASIC8.16□□□□□ -1.1
COL15A1P39059 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
COL15A1P39059 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
COL15A1P39059 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL15A1P39059 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
COL15A1P39059 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
COL15A1P39059 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.16□□□□□ -1.1
COL15A1P39059 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.16□□□□□ -1.1
COL15A1P39059 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL15A1P39059 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL15A1P39059 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
COL15A1P39059 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL15A1P39059 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL15A1P39059 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL15A1P39059 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL15A1P39059 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
COL15A1P39059 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
COL15A1P39059 CTNNA1P1-201ENST00000515849 2728 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL15A1P39059 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL15A1P39059 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL15A1P39059 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL15A1P39059 AC010624.4-201ENST00000597606 1351 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL15A1P39059 SNORA17A-201ENST00000391185 133 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 SLC20A1P1-201ENST00000413906 956 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC8.15□□□□□ -1.1
COL15A1P39059 BZW1P1-201ENST00000454901 1240 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC8.15□□□□□ -1.1
COL15A1P39059 AC023194.2-201ENST00000465398 406 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC8.15□□□□□ -1.1
COL15A1P39059 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC8.15□□□□□ -1.1
COL15A1P39059 AC106872.4-201ENST00000510050 523 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 KHDC1P1-201ENST00000511053 508 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC8.15□□□□□ -1.1
COL15A1P39059 RNA5SP340-201ENST00000517132 107 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 AP000662.1-201ENST00000530952 487 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC8.15□□□□□ -1.1
COL15A1P39059 AC092332.1-201ENST00000563684 829 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC8.15□□□□□ -1.1
COL15A1P39059 AL953862.2-201ENST00000603089 820 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 AC079791.1-201ENST00000605356 973 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 AC016252.1-201ENST00000609721 474 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 MRPL57P1-201ENST00000621486 265 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 SNORA17.5-201ENST00000630429 132 ntBASIC8.15□□□□□ -1.1
COL15A1P39059 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL15A1P39059 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.15□□□□□ -1.1
COL15A1P39059 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
COL15A1P39059 AC018717.1-201ENST00000457712 1505 ntBASIC8.15□□□□□ -1.11
COL15A1P39059 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
COL15A1P39059 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
COL15A1P39059 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
COL15A1P39059 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
COL15A1P39059 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
COL15A1P39059 AC092821.3-202ENST00000641304 2767 ntBASIC8.15□□□□□ -1.11
COL15A1P39059 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
COL15A1P39059 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL15A1P39059 AC091305.2-201ENST00000624049 1576 ntBASIC8.14□□□□□ -1.11
COL15A1P39059 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
COL15A1P39059 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
COL15A1P39059 AL596244.1-201ENST00000567068 3779 ntBASIC8.14□□□□□ -1.11
COL15A1P39059 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.14□□□□□ -1.11
COL15A1P39059 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.14□□□□□ -1.11
COL15A1P39059 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL15A1P39059 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.14□□□□□ -1.11
COL15A1P39059 SUGT1P2-201ENST00000379452 992 ntBASIC8.14□□□□□ -1.11
COL15A1P39059 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
COL15A1P39059 RNU1-46P-201ENST00000384425 164 ntBASIC8.14□□□□□ -1.11
COL15A1P39059 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL15A1P39059 AL023284.3-201ENST00000407767 334 ntBASIC8.14□□□□□ -1.11
COL15A1P39059 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC8.14□□□□□ -1.11
COL15A1P39059 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.14□□□□□ -1.11
COL15A1P39059 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
COL15A1P39059 AC003989.1-201ENST00000434569 565 ntBASIC8.14□□□□□ -1.11
COL15A1P39059 ATP6V1E1P1-201ENST00000439215 681 ntBASIC8.14□□□□□ -1.11
COL15A1P39059 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC8.14□□□□□ -1.11
COL15A1P39059 SUMO2P10-201ENST00000452006 288 ntBASIC8.14□□□□□ -1.11
COL15A1P39059 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL15A1P39059 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC8.14□□□□□ -1.11
COL15A1P39059 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.14□□□□□ -1.11
COL15A1P39059 AC010480.1-201ENST00000624823 684 ntBASIC8.14□□□□□ -1.11
COL15A1P39059 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC8.14□□□□□ -1.11
COL15A1P39059 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL15A1P39059 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
COL15A1P39059 MTCO1P28-201ENST00000574177 1528 ntBASIC8.14□□□□□ -1.11
COL15A1P39059 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
COL15A1P39059 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC8.14□□□□□ -1.11
COL15A1P39059 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL15A1P39059 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
COL15A1P39059 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL15A1P39059 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.14□□□□□ -1.11
COL15A1P39059 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.14□□□□□ -1.11
COL15A1P39059 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL15A1P39059 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC8.14□□□□□ -1.11
COL15A1P39059 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL15A1P39059 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
COL15A1P39059 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms