Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH3P22223 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH3P22223 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH3P22223 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH3P22223 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH3P22223 NR1H5P-201ENST00000452683 1377 ntBASIC6.49□□□□□ -1.37
CDH3P22223 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CDH3P22223 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH3P22223 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CDH3P22223 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CDH3P22223 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH3P22223 RNU1-55P-201ENST00000365510 158 ntBASIC6.49□□□□□ -1.37
CDH3P22223 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH3P22223 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
CDH3P22223 SMC4P1-201ENST00000414479 527 ntBASIC6.49□□□□□ -1.37
CDH3P22223 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH3P22223 Z82198.3-201ENST00000421145 199 ntBASIC6.49□□□□□ -1.37
CDH3P22223 AC239367.3-201ENST00000428996 814 ntBASIC6.49□□□□□ -1.37
CDH3P22223 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH3P22223 AC013403.1-201ENST00000436954 263 ntBASIC6.49□□□□□ -1.37
CDH3P22223 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH3P22223 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH3P22223 RPL12P49-201ENST00000441100 121 ntBASIC6.49□□□□□ -1.37
CDH3P22223 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH3P22223 AKR1D1P1-201ENST00000457236 936 ntBASIC6.49□□□□□ -1.37
CDH3P22223 RN7SL393P-201ENST00000463588 296 ntBASIC6.49□□□□□ -1.37
CDH3P22223 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH3P22223 AC044810.1-201ENST00000480271 711 ntBASIC6.49□□□□□ -1.37
CDH3P22223 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH3P22223 RN7SKP248-201ENST00000516278 305 ntBASIC6.49□□□□□ -1.37
CDH3P22223 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH3P22223 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.49□□□□□ -1.37
CDH3P22223 AC084337.1-201ENST00000524809 686 ntBASIC6.49□□□□□ -1.37
CDH3P22223 OR4A6P-201ENST00000534364 970 ntBASIC6.49□□□□□ -1.37
CDH3P22223 BTG1P1-201ENST00000540396 508 ntBASIC6.49□□□□□ -1.37
CDH3P22223 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CDH3P22223 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH3P22223 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CDH3P22223 ANP32BP1-202ENST00000568553 737 ntBASIC6.49□□□□□ -1.37
CDH3P22223 PPIAP14-201ENST00000577627 496 ntBASIC6.49□□□□□ -1.37
CDH3P22223 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH3P22223 AC023389.2-201ENST00000580031 955 ntBASIC6.49□□□□□ -1.37
CDH3P22223 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH3P22223 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.49□□□□□ -1.37
CDH3P22223 U1.41-201ENST00000617626 165 ntBASIC6.49□□□□□ -1.37
CDH3P22223 AC034229.6-201ENST00000623704 224 ntBASIC6.49□□□□□ -1.37
CDH3P22223 AC068213.1-201ENST00000625124 226 ntBASIC6.49□□□□□ -1.37
CDH3P22223 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH3P22223 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH3P22223 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CDH3P22223 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH3P22223 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH3P22223 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH3P22223 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH3P22223 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.49□□□□□ -1.37
CDH3P22223 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CDH3P22223 FANCD2P2-201ENST00000437591 1400 ntBASIC6.49□□□□□ -1.37
CDH3P22223 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH3P22223 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH3P22223 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH3P22223 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CDH3P22223 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH3P22223 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
CDH3P22223 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CDH3P22223 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CDH3P22223 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH3P22223 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 RNA5SP321-201ENST00000362722 111 ntBASIC6.48□□□□□ -1.37
CDH3P22223 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 MIR191-201ENST00000384873 92 ntBASIC6.48□□□□□ -1.37
CDH3P22223 RN7SKP271-201ENST00000410528 320 ntBASIC6.48□□□□□ -1.37
CDH3P22223 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH3P22223 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 CDK7P1-201ENST00000434574 693 ntBASIC6.48□□□□□ -1.37
CDH3P22223 DNAJC19P5-201ENST00000443295 316 ntBASIC6.48□□□□□ -1.37
CDH3P22223 RPS18P1-201ENST00000447840 458 ntBASIC6.48□□□□□ -1.37
CDH3P22223 AC099340.1-201ENST00000475247 599 ntBASIC6.48□□□□□ -1.37
CDH3P22223 AC015524.1-201ENST00000491585 472 ntBASIC6.48□□□□□ -1.37
CDH3P22223 EIF4E2P2-201ENST00000492033 736 ntBASIC6.48□□□□□ -1.37
CDH3P22223 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH3P22223 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CDH3P22223 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.48□□□□□ -1.37
CDH3P22223 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 NACAP5-201ENST00000509863 636 ntBASIC6.48□□□□□ -1.37
CDH3P22223 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH3P22223 AC011352.2-201ENST00000514574 1016 ntBASIC6.48□□□□□ -1.37
CDH3P22223 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH3P22223 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.48□□□□□ -1.37
CDH3P22223 OR9G2P-201ENST00000533326 880 ntBASIC6.48□□□□□ -1.37
CDH3P22223 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH3P22223 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms