Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC8.18□□□□□ -1.1
LIG1P18858 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
LIG1P18858 RN7SKP182-201ENST00000410772 298 ntBASIC8.18□□□□□ -1.1
LIG1P18858 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC8.18□□□□□ -1.1
LIG1P18858 AC009518.2-201ENST00000418056 731 ntBASIC8.18□□□□□ -1.1
LIG1P18858 FTOP1-201ENST00000419363 861 ntBASIC8.18□□□□□ -1.1
LIG1P18858 RPL17P17-201ENST00000419491 557 ntBASIC8.18□□□□□ -1.1
LIG1P18858 TEX41-203ENST00000420472 765 ntTSL 3 BASIC8.18□□□□□ -1.1
LIG1P18858 AC013268.2-201ENST00000420753 337 ntBASIC8.18□□□□□ -1.1
LIG1P18858 RPSAP1-201ENST00000421328 880 ntBASIC8.18□□□□□ -1.1
LIG1P18858 GRPEL2P2-201ENST00000421856 670 ntBASIC8.18□□□□□ -1.1
LIG1P18858 NANOGP5-201ENST00000424456 877 ntBASIC8.18□□□□□ -1.1
LIG1P18858 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC8.18□□□□□ -1.1
LIG1P18858 CR391992.1-201ENST00000438601 394 ntBASIC8.18□□□□□ -1.1
LIG1P18858 THAP5P1-201ENST00000439089 262 ntBASIC8.18□□□□□ -1.1
LIG1P18858 GTF2F2P2-201ENST00000445825 721 ntBASIC8.18□□□□□ -1.1
LIG1P18858 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC8.18□□□□□ -1.1
LIG1P18858 ZNF886P-201ENST00000450781 723 ntBASIC8.18□□□□□ -1.1
LIG1P18858 AL929410.2-201ENST00000451170 189 ntBASIC8.18□□□□□ -1.1
LIG1P18858 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC8.18□□□□□ -1.1
LIG1P18858 C1DP3-201ENST00000455013 423 ntBASIC8.18□□□□□ -1.1
LIG1P18858 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC8.18□□□□□ -1.1
LIG1P18858 CABYRP1-201ENST00000465493 1045 ntBASIC8.18□□□□□ -1.1
LIG1P18858 AC008967.1-201ENST00000504843 163 ntBASIC8.18□□□□□ -1.1
LIG1P18858 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC8.18□□□□□ -1.1
LIG1P18858 AC111000.1-201ENST00000514545 713 ntBASIC8.18□□□□□ -1.1
LIG1P18858 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC8.18□□□□□ -1.1
LIG1P18858 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC8.18□□□□□ -1.1
LIG1P18858 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC8.18□□□□□ -1.1
LIG1P18858 ASB8-203ENST00000535988 679 ntTSL 2 BASIC8.18□□□□□ -1.1
LIG1P18858 EGLN3P1-201ENST00000541727 720 ntBASIC8.18□□□□□ -1.1
LIG1P18858 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC8.18□□□□□ -1.1
LIG1P18858 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC8.18□□□□□ -1.1
LIG1P18858 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC8.18□□□□□ -1.1
LIG1P18858 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC8.18□□□□□ -1.1
LIG1P18858 FRG2IP-201ENST00000563581 781 ntBASIC8.18□□□□□ -1.1
LIG1P18858 MIR3135A-201ENST00000578460 77 ntBASIC8.18□□□□□ -1.1
LIG1P18858 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC8.18□□□□□ -1.1
LIG1P18858 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC8.18□□□□□ -1.1
LIG1P18858 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.18□□□□□ -1.1
LIG1P18858 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.18□□□□□ -1.1
LIG1P18858 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
LIG1P18858 AL035417.2-201ENST00000603887 796 ntBASIC8.18□□□□□ -1.1
LIG1P18858 AC124016.2-201ENST00000610058 665 ntBASIC8.18□□□□□ -1.1
LIG1P18858 MIR8084-201ENST00000614105 89 ntBASIC8.18□□□□□ -1.1
LIG1P18858 AC007204.1-201ENST00000621794 555 ntBASIC8.18□□□□□ -1.1
LIG1P18858 DLST-216ENST00000626051 252 ntTSL 5 BASIC8.18□□□□□ -1.1
LIG1P18858 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.18□□□□□ -1.1
LIG1P18858 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC8.18□□□□□ -1.1
LIG1P18858 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC8.18□□□□□ -1.1
LIG1P18858 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC8.18□□□□□ -1.1
LIG1P18858 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.18□□□□□ -1.1
LIG1P18858 AC092701.1-201ENST00000623627 1551 ntBASIC8.18□□□□□ -1.1
LIG1P18858 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC8.18□□□□□ -1.1
LIG1P18858 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
LIG1P18858 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LIG1P18858 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LIG1P18858 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LIG1P18858 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LIG1P18858 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
LIG1P18858 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.17□□□□□ -1.1
LIG1P18858 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
LIG1P18858 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LIG1P18858 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LIG1P18858 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LIG1P18858 RNA5SP238-201ENST00000365464 120 ntBASIC8.17□□□□□ -1.1
LIG1P18858 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC8.17□□□□□ -1.1
LIG1P18858 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
LIG1P18858 SNORD116-1-201ENST00000384335 95 ntBASIC8.17□□□□□ -1.1
LIG1P18858 AC006511.2-201ENST00000388966 660 ntBASIC8.17□□□□□ -1.1
LIG1P18858 AMZ2P2-201ENST00000406819 1057 ntBASIC8.17□□□□□ -1.1
LIG1P18858 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.17□□□□□ -1.1
LIG1P18858 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
LIG1P18858 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC8.17□□□□□ -1.1
LIG1P18858 AC020983.1-201ENST00000417063 543 ntBASIC8.17□□□□□ -1.1
LIG1P18858 RPL22P18-201ENST00000417197 377 ntBASIC8.17□□□□□ -1.1
LIG1P18858 AC010099.3-201ENST00000423896 409 ntBASIC8.17□□□□□ -1.1
LIG1P18858 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
LIG1P18858 MTND1P20-201ENST00000430341 950 ntBASIC8.17□□□□□ -1.1
LIG1P18858 NDUFA5P10-201ENST00000432147 357 ntBASIC8.17□□□□□ -1.1
LIG1P18858 AC091390.2-201ENST00000432573 374 ntBASIC8.17□□□□□ -1.1
LIG1P18858 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC8.17□□□□□ -1.1
LIG1P18858 HMGN1P6-201ENST00000438508 291 ntBASIC8.17□□□□□ -1.1
LIG1P18858 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC8.17□□□□□ -1.1
LIG1P18858 AL513321.1-201ENST00000441175 761 ntBASIC8.17□□□□□ -1.1
LIG1P18858 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC8.17□□□□□ -1.1
LIG1P18858 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC8.17□□□□□ -1.1
LIG1P18858 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms