Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL1P09341 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CXCL1P09341 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL1P09341 OR10D1P-201ENST00000355343 936 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 SNORA70.5-201ENST00000365519 135 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
CXCL1P09341 RNA5SP187-201ENST00000384400 119 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 AL034372.1-201ENST00000407586 754 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 RN7SKP129-201ENST00000410288 299 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 AL158827.1-201ENST00000416300 391 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC4.9□□□□□ -1.63
CXCL1P09341 RPSAP59-201ENST00000421048 890 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL1P09341 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC4.9□□□□□ -1.63
CXCL1P09341 PAICSP2-201ENST00000429118 1150 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.9□□□□□ -1.63
CXCL1P09341 AC018804.1-201ENST00000430381 618 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC4.9□□□□□ -1.63
CXCL1P09341 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC4.9□□□□□ -1.63
CXCL1P09341 AC105052.2-201ENST00000434317 794 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 AC099670.2-201ENST00000435130 321 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 RPS3AP38-201ENST00000435889 763 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL1P09341 AC092967.1-201ENST00000449016 481 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 AC016489.1-201ENST00000461109 375 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 RPS2P25-201ENST00000467247 580 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC4.9□□□□□ -1.63
CXCL1P09341 RPS26P6-201ENST00000475156 348 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL1P09341 RPL34P29-201ENST00000491411 325 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CXCL1P09341 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC4.9□□□□□ -1.63
CXCL1P09341 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.9□□□□□ -1.63
CXCL1P09341 IGLC4-201ENST00000517690 248 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC4.9□□□□□ -1.63
CXCL1P09341 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC4.9□□□□□ -1.63
CXCL1P09341 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC4.9□□□□□ -1.63
CXCL1P09341 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.9□□□□□ -1.63
CXCL1P09341 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC4.9□□□□□ -1.63
CXCL1P09341 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC4.9□□□□□ -1.63
CXCL1P09341 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC4.9□□□□□ -1.63
CXCL1P09341 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.9□□□□□ -1.63
CXCL1P09341 TXNP4-201ENST00000575018 310 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC4.9□□□□□ -1.63
CXCL1P09341 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC4.9□□□□□ -1.63
CXCL1P09341 AC027334.1-201ENST00000603257 310 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC4.9□□□□□ -1.63
CXCL1P09341 AC069542.2-201ENST00000624816 216 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 SNORA16A-202ENST00000628458 135 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 MAPK10-350ENST00000641777 965 ntBASIC4.9□□□□□ -1.63
CXCL1P09341 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL1P09341 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CXCL1P09341 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL1P09341 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CXCL1P09341 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CXCL1P09341 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL1P09341 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CXCL1P09341 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.9□□□□□ -1.63
CXCL1P09341 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
CXCL1P09341 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CXCL1P09341 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL1P09341 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL1P09341 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CXCL1P09341 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.89□□□□□ -1.63
CXCL1P09341 BCORP1-203ENST00000513194 5093 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC4.89□□□□□ -1.63
CXCL1P09341 AC018809.2-201ENST00000602436 3823 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.89□□□□□ -1.63
CXCL1P09341 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CXCL1P09341 SNORD1C-201ENST00000363315 78 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 RNU4-81P-201ENST00000363561 144 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 MIR614-201ENST00000385082 90 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CXCL1P09341 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 U3.43-201ENST00000410734 213 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 MRPS21P5-201ENST00000417885 231 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC4.89□□□□□ -1.63
CXCL1P09341 AC092066.1-201ENST00000425131 317 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 SNRPEP5-201ENST00000425442 278 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 CYP4F34P-201ENST00000425951 481 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 FTLP17-201ENST00000432567 525 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 AC013403.1-201ENST00000436954 263 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CXCL1P09341 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC4.89□□□□□ -1.63
CXCL1P09341 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.89□□□□□ -1.63
CXCL1P09341 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC4.89□□□□□ -1.63
CXCL1P09341 MORF4L2P1-201ENST00000503761 858 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 AC091965.3-201ENST00000506236 208 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC4.89□□□□□ -1.63
CXCL1P09341 SNX18P23-201ENST00000510867 677 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 AC117383.2-201ENST00000514722 322 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC4.89□□□□□ -1.63
CXCL1P09341 NDUFA3P2-201ENST00000531434 232 ntBASIC4.89□□□□□ -1.63
CXCL1P09341 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC4.89□□□□□ -1.63
CXCL1P09341 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms