Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CHGBP05060 AC022905.1-201ENST00000503430 3048 ntBASIC7.87□□□□□ -1.15
CHGBP05060 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.87□□□□□ -1.15
CHGBP05060 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CHGBP05060 AC087392.3-202ENST00000358446 1754 ntBASIC7.87□□□□□ -1.15
CHGBP05060 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
CHGBP05060 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CHGBP05060 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CHGBP05060 AC092821.2-201ENST00000545710 2042 ntBASIC7.87□□□□□ -1.15
CHGBP05060 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CHGBP05060 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
CHGBP05060 MIR541-201ENST00000401360 84 ntBASIC7.87□□□□□ -1.15
CHGBP05060 VIM2P-201ENST00000402383 1294 ntBASIC7.87□□□□□ -1.15
CHGBP05060 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.87□□□□□ -1.15
CHGBP05060 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC7.87□□□□□ -1.15
CHGBP05060 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
CHGBP05060 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.87□□□□□ -1.15
CHGBP05060 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.87□□□□□ -1.15
CHGBP05060 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC7.87□□□□□ -1.15
CHGBP05060 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC7.87□□□□□ -1.15
CHGBP05060 AL139156.3-201ENST00000454802 394 ntBASIC7.87□□□□□ -1.15
CHGBP05060 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.87□□□□□ -1.15
CHGBP05060 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.87□□□□□ -1.15
CHGBP05060 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
CHGBP05060 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CHGBP05060 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC7.87□□□□□ -1.15
CHGBP05060 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.87□□□□□ -1.15
CHGBP05060 AC010460.2-201ENST00000509054 677 ntBASIC7.87□□□□□ -1.15
CHGBP05060 TPT1P8-201ENST00000510120 555 ntBASIC7.87□□□□□ -1.15
CHGBP05060 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.87□□□□□ -1.15
CHGBP05060 AC093816.1-201ENST00000515076 913 ntBASIC7.87□□□□□ -1.15
CHGBP05060 RNA5SP318-201ENST00000516352 92 ntBASIC7.87□□□□□ -1.15
CHGBP05060 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC7.87□□□□□ -1.15
CHGBP05060 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC7.87□□□□□ -1.15
CHGBP05060 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.87□□□□□ -1.15
CHGBP05060 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.87□□□□□ -1.15
CHGBP05060 AC025283.1-201ENST00000572039 734 ntBASIC7.87□□□□□ -1.15
CHGBP05060 NDUFB9P1-201ENST00000604683 510 ntBASIC7.87□□□□□ -1.15
CHGBP05060 AC242628.1-201ENST00000606810 391 ntBASIC7.87□□□□□ -1.15
CHGBP05060 MKKS-203ENST00000609375 882 ntTSL 2 BASIC7.87□□□□□ -1.15
CHGBP05060 AL391834.1-201ENST00000609609 560 ntBASIC7.87□□□□□ -1.15
CHGBP05060 MIR6780B-201ENST00000610307 79 ntBASIC7.87□□□□□ -1.15
CHGBP05060 AP001264.1-201ENST00000620602 703 ntBASIC7.87□□□□□ -1.15
CHGBP05060 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CHGBP05060 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
CHGBP05060 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CHGBP05060 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.87□□□□□ -1.15
CHGBP05060 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CHGBP05060 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.87□□□□□ -1.15
CHGBP05060 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.87□□□□□ -1.15
CHGBP05060 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
CHGBP05060 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CHGBP05060 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CHGBP05060 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CHGBP05060 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CHGBP05060 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHGBP05060 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHGBP05060 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHGBP05060 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC7.86□□□□□ -1.15
CHGBP05060 MRPS6P2-201ENST00000381143 370 ntBASIC7.86□□□□□ -1.15
CHGBP05060 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.86□□□□□ -1.15
CHGBP05060 AL359092.1-201ENST00000417156 265 ntBASIC7.86□□□□□ -1.15
CHGBP05060 VN1R3-201ENST00000418822 919 ntBASIC7.86□□□□□ -1.15
CHGBP05060 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.86□□□□□ -1.15
CHGBP05060 NFYAP1-201ENST00000431953 972 ntBASIC7.86□□□□□ -1.15
CHGBP05060 RPL17P35-201ENST00000432217 549 ntBASIC7.86□□□□□ -1.15
CHGBP05060 UBE2V2P1-201ENST00000434717 398 ntBASIC7.86□□□□□ -1.15
CHGBP05060 NPM1P23-201ENST00000440193 849 ntBASIC7.86□□□□□ -1.15
CHGBP05060 AC245291.3-201ENST00000443400 292 ntBASIC7.86□□□□□ -1.15
CHGBP05060 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.86□□□□□ -1.15
CHGBP05060 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.86□□□□□ -1.15
CHGBP05060 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.86□□□□□ -1.15
CHGBP05060 TVP23CP1-201ENST00000450317 639 ntBASIC7.86□□□□□ -1.15
CHGBP05060 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC7.86□□□□□ -1.15
CHGBP05060 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC7.86□□□□□ -1.15
CHGBP05060 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CHGBP05060 AC117395.1-201ENST00000487390 403 ntBASIC7.86□□□□□ -1.15
CHGBP05060 AL117692.1-201ENST00000494283 713 ntBASIC7.86□□□□□ -1.15
CHGBP05060 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.86□□□□□ -1.15
CHGBP05060 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.86□□□□□ -1.15
CHGBP05060 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.86□□□□□ -1.15
CHGBP05060 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.86□□□□□ -1.15
CHGBP05060 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.86□□□□□ -1.15
CHGBP05060 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.86□□□□□ -1.15
CHGBP05060 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.86□□□□□ -1.15
CHGBP05060 AC244034.2-201ENST00000562504 509 ntBASIC7.86□□□□□ -1.15
CHGBP05060 OR1E3-201ENST00000575608 948 ntBASIC7.86□□□□□ -1.15
CHGBP05060 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.86□□□□□ -1.15
CHGBP05060 AC012175.1-201ENST00000603755 531 ntBASIC7.86□□□□□ -1.15
CHGBP05060 AC006249.1-201ENST00000621223 471 ntBASIC7.86□□□□□ -1.15
CHGBP05060 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CHGBP05060 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHGBP05060 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CHGBP05060 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHGBP05060 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CHGBP05060 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CHGBP05060 AC007406.5-201ENST00000570140 3170 ntBASIC7.85□□□□□ -1.15
CHGBP05060 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CHGBP05060 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CHGBP05060 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms