Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 RN7SKP129-201ENST00000410288 299 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 RN7SKP39-201ENST00000410773 322 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 RN7SKP296-201ENST00000411185 341 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 RPS7P12-201ENST00000422385 582 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AL645936.2-201ENST00000430565 928 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AK3P5-201ENST00000432033 519 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AC105052.2-201ENST00000434317 794 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 MEF2AP1-201ENST00000454867 863 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 OSTCP1-201ENST00000455507 450 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 NMNAT1P3-201ENST00000457517 888 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 MYL6P4-201ENST00000477911 453 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AC233290.1-201ENST00000553021 1186 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AC093524.1-201ENST00000564266 1094 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 PRR13P3-201ENST00000603578 376 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AL021368.3-201ENST00000607119 578 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AL589935.2-201ENST00000616471 1231 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 pRNA.9-201ENST00000618609 89 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 uc_338.37-201ENST00000620113 186 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 OR5AU1-204ENST00000641822 1197 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 BX284613.1-201ENST00000452221 1641 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
HLA-DQA1P01909 AC239868.2-201ENST00000564237 4527 ntBASIC4.82□□□□□ -1.64
HLA-DQA1P01909 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AL080312.1-201ENST00000256654 824 ntBASIC4.81□□□□□ -1.64
HLA-DQA1P01909 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 RNA5SP478-201ENST00000364657 115 ntBASIC4.81□□□□□ -1.64
HLA-DQA1P01909 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 RN7SKP151-201ENST00000410230 316 ntBASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 PAICSP2-201ENST00000429118 1150 ntBASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC236972.4-201ENST00000458091 963 ntBASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 TAAR3P-202ENST00000481759 1025 ntBASIC4.81□□□□□ -1.64
HLA-DQA1P01909 RN7SL152P-201ENST00000484176 298 ntBASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC021146.11-201ENST00000503319 491 ntBASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC017007.1-201ENST00000511960 415 ntBASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 MIR4685-201ENST00000578185 69 ntBASIC4.81□□□□□ -1.64
HLA-DQA1P01909 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC114546.4-201ENST00000624413 369 ntBASIC4.81□□□□□ -1.64
HLA-DQA1P01909 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC4.81□□□□□ -1.64
HLA-DQA1P01909 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms