Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 CRP-204ENST00000368112 787 ntTSL 2 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 EEF1A1P24-201ENST00000451469 1378 ntBASIC8.06□□□□□ -1.12
SCN11AQ9UI33 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 CIR1P2-201ENST00000514821 1342 ntBASIC8.06□□□□□ -1.12
SCN11AQ9UI33 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 AP003396.4-201ENST00000527574 265 ntBASIC8.06□□□□□ -1.12
SCN11AQ9UI33 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 AC010547.6-201ENST00000571789 193 ntBASIC8.06□□□□□ -1.12
SCN11AQ9UI33 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 AC012254.5-201ENST00000623573 478 ntBASIC8.06□□□□□ -1.12
SCN11AQ9UI33 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 LARS-212ENST00000510191 3737 ntTSL 2 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AC013488.1-201ENST00000526618 1838 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AF287957.1-201ENST00000607368 1595 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 TMSB4XP4-201ENST00000323496 618 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 RNA5SP510-201ENST00000364697 99 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 MORF4-201ENST00000447135 971 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 NXT1P1-201ENST00000458481 316 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AC106872.4-201ENST00000510050 523 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 SNORA26.10-201ENST00000516427 141 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 CTNNA1P1-201ENST00000515849 2728 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 RN7SKP206-201ENST00000410823 293 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 RPL35AP3-201ENST00000414680 288 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AL355355.1-201ENST00000442900 793 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AC124945.1-201ENST00000485133 188 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 SLC25A14P1-201ENST00000502867 901 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 RNA5SP438-201ENST00000516561 112 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC8.05□□□□□ -1.12
SCN11AQ9UI33 AC110597.1-201ENST00000562669 3176 ntBASIC8.05□□□□□ -1.12
SCN11AQ9UI33 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 NCOA4P3-201ENST00000513203 1877 ntBASIC8.04□□□□□ -1.12
SCN11AQ9UI33 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 PSG10P-201ENST00000501199 1500 ntBASIC8.04□□□□□ -1.12
SCN11AQ9UI33 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 AL591848.4-201ENST00000567832 3472 ntBASIC8.04□□□□□ -1.12
SCN11AQ9UI33 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC8.04□□□□□ -1.12
SCN11AQ9UI33 CYP4F30P-202ENST00000420048 405 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms