Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 RPL35AP24-201ENST00000413846 330 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AL672167.3-201ENST00000465951 960 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 HAUS8P1-201ENST00000549005 542 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AC023824.7-201ENST00000623041 5731 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 NEK2P4-201ENST00000425793 1329 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 AL512310.3-201ENST00000547023 1335 ntBASIC6.43□□□□□ -1.38
CHD7Q9P2D1 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHD7Q9P2D1 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 RPL37P18-201ENST00000411602 243 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 VN1R54P-201ENST00000435210 1049 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AC007204.2-201ENST00000615022 616 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AC136428.4-201ENST00000634254 1155 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 CASC19-264ENST00000641912 1184 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 ZMYND8-217ENST00000536340 5273 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 RN7SKP23-201ENST00000625159 4301 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 GUCY1B2-204ENST00000531898 1979 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 OR11H13P-201ENST00000359695 979 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AL050335.1-201ENST00000396909 869 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AZGP1P2-201ENST00000454506 345 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 RPL7AP6-201ENST00000477943 801 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 SUMO2P7-201ENST00000511179 285 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AC021146.10-201ENST00000515628 706 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AC115837.1-201ENST00000517662 1001 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 MIR3189-201ENST00000578735 73 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 OR7A1P-201ENST00000601206 970 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AC011592.1-201ENST00000624647 3634 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 DHX8-201ENST00000262415 5558 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 AP001784.1-201ENST00000624107 428 ntBASIC6.42□□□□□ -1.38
CHD7Q9P2D1 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.42□□□□□ -1.38
CHD7Q9P2D1 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHD7Q9P2D1 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHD7Q9P2D1 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.41□□□□□ -1.38
CHD7Q9P2D1 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CHD7Q9P2D1 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CHD7Q9P2D1 MIR550A3-201ENST00000390735 95 ntBASIC6.41□□□□□ -1.38
CHD7Q9P2D1 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
CHD7Q9P2D1 RANP1-206ENST00000455094 651 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms