Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ERG-206ENST00000398911 4914 ntTSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ZNF812P-201ENST00000457674 1694 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ZNF840P-201ENST00000504759 1996 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AL391994.1-201ENST00000254724 282 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 NACA3P-201ENST00000359690 648 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 CREM-213ENST00000374734 711 ntTSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 RACK1-201ENST00000376817 965 ntTSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 EEF1AKMT1-202ENST00000382758 1042 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 Y_RNA.465-201ENST00000384293 102 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 Y_RNA.554-201ENST00000384672 102 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 SNORD115-47-201ENST00000391226 86 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AL590004.1-201ENST00000405321 300 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 PUDPP1-201ENST00000421058 495 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 PIGX-204ENST00000421265 677 ntTSL 2 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 DNAJA1P2-201ENST00000421360 1197 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AL023755.1-203ENST00000422253 519 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 CREM-231ENST00000479070 939 ntTSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC018695.1-201ENST00000484096 664 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 IGHVIV-44-1-201ENST00000519334 338 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 FOXG1-AS1-201ENST00000546560 538 ntTSL 3 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 EEF1A1P2-201ENST00000553854 1447 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC006530.1-201ENST00000555980 571 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC006504.3-201ENST00000586818 523 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 BMS1P7-201ENST00000602440 1052 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC027243.2-201ENST00000602530 724 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC068802.1-201ENST00000603420 732 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC104458.1-201ENST00000608243 463 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AL391497.1-201ENST00000608671 547 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC055764.2-201ENST00000610089 670 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC106782.6-201ENST00000611264 512 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC007382.1-201ENST00000624376 2618 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AL157786.1-207ENST00000627771 695 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 LINC00663-203ENST00000586885 2546 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC126474.2-201ENST00000623268 1750 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 AC020978.6-201ENST00000571197 3177 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 TRIM51HP-202ENST00000530412 1823 ntBASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
CUEDC1Q9NWM3 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 ERG-205ENST00000398910 4954 ntTSL 5 BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUEDC1Q9NWM3 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms