Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 EEF1A1P12-201ENST00000443590 1346 ntBASIC4.85□□□□□ -1.63
AP1S3Q96PC3 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 AL512329.1-201ENST00000404600 1592 ntBASIC4.85□□□□□ -1.63
AP1S3Q96PC3 UGT2B24P-201ENST00000514441 1597 ntBASIC4.85□□□□□ -1.63
AP1S3Q96PC3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 SMG1P4-204ENST00000523028 4131 ntBASIC4.85□□□□□ -1.63
AP1S3Q96PC3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AP1S3Q96PC3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL449283.1-201ENST00000602631 3403 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 ZBTB8OSP2-201ENST00000423890 504 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 EIF4A1P5-201ENST00000428062 1095 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 RPL5P10-201ENST00000445207 894 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 VN1R38P-201ENST00000450265 887 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 RN7SL685P-201ENST00000476271 298 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC017007.1-201ENST00000511960 415 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC026774.2-201ENST00000513990 1098 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 SCARNA18.2-201ENST00000516882 84 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 IGLC4-201ENST00000517690 248 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC011921.2-201ENST00000589465 152 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC006116.6-201ENST00000593258 1103 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC010503.3-201ENST00000594355 540 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL035410.2-201ENST00000604963 864 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL031777.2-201ENST00000611953 196 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 RNA5SP439-201ENST00000617595 124 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL353684.1-201ENST00000622677 1120 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AC026108.1-201ENST00000635444 547 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AP000550.3-201ENST00000637734 379 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL356585.10-201ENST00000641883 123 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 AL121936.2-201ENST00000641935 662 ntBASIC4.84□□□□□ -1.63
AP1S3Q96PC3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AP1S3Q96PC3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC4.84□□□□□ -1.64
AP1S3Q96PC3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
AP1S3Q96PC3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
AP1S3Q96PC3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
AP1S3Q96PC3 HSP90AA2P-201ENST00000530115 2196 ntBASIC4.84□□□□□ -1.64
AP1S3Q96PC3 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
AP1S3Q96PC3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
AP1S3Q96PC3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
AP1S3Q96PC3 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms