Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RARSP1-201ENST00000542842 1418 ntBASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 AC012254.3-201ENST00000591183 2117 ntBASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 RN7SKP161-201ENST00000411110 305 ntBASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 AC016769.2-201ENST00000414815 475 ntBASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 AC127526.2-201ENST00000426436 775 ntBASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 AC064862.4-201ENST00000442180 334 ntBASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 IGKV2-19-201ENST00000518132 283 ntBASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 AL356801.1-201ENST00000559320 294 ntBASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 AC245014.3-201ENST00000618589 347 ntBASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 MAPK10-344ENST00000641718 3746 ntBASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
CDC42BPAQ5VT25 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 AC245060.4-201ENST00000413293 1121 ntBASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 MGAT2P1-201ENST00000449718 797 ntBASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 VN1R38P-201ENST00000450265 887 ntBASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 AC016027.4-201ENST00000450866 277 ntBASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 NENFP3-201ENST00000503735 313 ntBASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 SNORD95-201ENST00000579879 68 ntBASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 AC013244.1-201ENST00000604279 193 ntBASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 AC010478.1-201ENST00000601500 6762 ntBASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 SHQ1P1-201ENST00000437111 1544 ntBASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 AC011379.1-201ENST00000508713 3025 ntBASIC9.4□□□□□ -0.9
CDC42BPAQ5VT25 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42BPAQ5VT25 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42BPAQ5VT25 BX322650.1-201ENST00000332359 2143 ntBASIC9.4□□□□□ -0.91
CDC42BPAQ5VT25 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42BPAQ5VT25 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42BPAQ5VT25 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42BPAQ5VT25 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
CDC42BPAQ5VT25 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC9.4□□□□□ -0.91
CDC42BPAQ5VT25 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
CDC42BPAQ5VT25 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 RN7SL629P-201ENST00000489622 285 ntBASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 LRRC37A6P-202ENST00000448648 5444 ntBASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 OR7E25P-202ENST00000641088 5937 ntBASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 AC245096.1-201ENST00000413104 546 ntBASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 TRIM60P16-201ENST00000444048 694 ntBASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 SNX18P26-201ENST00000458433 740 ntBASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 OR6M2P-201ENST00000529831 871 ntBASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 AC139493.1-201ENST00000604368 397 ntBASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 AC005839.1-201ENST00000624148 3213 ntBASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CDC42BPAQ5VT25 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDC42BPAQ5VT25 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms