Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCNA1P78396 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.44□□□□□ -1.22
CCNA1P78396 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.44□□□□□ -1.22
CCNA1P78396 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCNA1P78396 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.44□□□□□ -1.22
CCNA1P78396 AC125612.1-201ENST00000547580 377 ntBASIC7.44□□□□□ -1.22
CCNA1P78396 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.44□□□□□ -1.22
CCNA1P78396 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.44□□□□□ -1.22
CCNA1P78396 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.44□□□□□ -1.22
CCNA1P78396 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
CCNA1P78396 AC026124.2-201ENST00000621847 656 ntBASIC7.44□□□□□ -1.22
CCNA1P78396 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCNA1P78396 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.44□□□□□ -1.22
CCNA1P78396 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCNA1P78396 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.44□□□□□ -1.22
CCNA1P78396 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCNA1P78396 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCNA1P78396 AP005139.1-201ENST00000580702 1647 ntBASIC7.44□□□□□ -1.22
CCNA1P78396 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.44□□□□□ -1.22
CCNA1P78396 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.44□□□□□ -1.22
CCNA1P78396 AC125238.2-201ENST00000430003 1440 ntBASIC7.44□□□□□ -1.22
CCNA1P78396 AC093225.1-201ENST00000506867 1408 ntBASIC7.44□□□□□ -1.22
CCNA1P78396 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 AC009135.2-201ENST00000624136 1768 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.43□□□□□ -1.22
CCNA1P78396 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CCNA1P78396 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.43□□□□□ -1.22
CCNA1P78396 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.43□□□□□ -1.22
CCNA1P78396 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CCNA1P78396 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 AC023490.2-201ENST00000359859 470 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.43□□□□□ -1.22
CCNA1P78396 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 AL157702.1-201ENST00000398764 426 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 MIR1204-201ENST00000408388 67 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 HMGN1P20-201ENST00000411849 300 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.43□□□□□ -1.22
CCNA1P78396 MED28P4-201ENST00000433137 572 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 AC003989.1-201ENST00000434569 565 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 AC094019.1-201ENST00000434678 472 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.43□□□□□ -1.22
CCNA1P78396 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.43□□□□□ -1.22
CCNA1P78396 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.43□□□□□ -1.22
CCNA1P78396 RN7SL104P-201ENST00000498686 293 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CCNA1P78396 KHDC1P1-201ENST00000511053 508 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.43□□□□□ -1.22
CCNA1P78396 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.43□□□□□ -1.22
CCNA1P78396 IGKV3D-34-201ENST00000522638 302 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 FXNP1-201ENST00000555153 337 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 CYCSP38-201ENST00000559840 322 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 AC008507.3-201ENST00000585753 472 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.43□□□□□ -1.22
CCNA1P78396 BX323046.1-201ENST00000610145 535 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 FAM27E2-201ENST00000619668 403 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 AC120057.5-201ENST00000623840 154 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.43□□□□□ -1.22
CCNA1P78396 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC7.43□□□□□ -1.22
CCNA1P78396 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.43□□□□□ -1.22
CCNA1P78396 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.43□□□□□ -1.22
CCNA1P78396 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CCNA1P78396 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.43□□□□□ -1.22
CCNA1P78396 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.43□□□□□ -1.22
CCNA1P78396 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCNA1P78396 AL034417.4-202ENST00000642135 2236 ntBASIC7.43□□□□□ -1.22
CCNA1P78396 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.42□□□□□ -1.22
CCNA1P78396 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CCNA1P78396 AL359694.2-201ENST00000567753 1615 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CCNA1P78396 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 RN7SKP78-201ENST00000364711 318 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 RN7SKP281-201ENST00000410472 352 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 RPL23AP85-201ENST00000421838 433 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.42□□□□□ -1.22
CCNA1P78396 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.42□□□□□ -1.22
CCNA1P78396 Z68868.1-201ENST00000429048 544 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCNA1P78396 RBMY2AP-201ENST00000445405 1157 ntBASIC7.42□□□□□ -1.22
CCNA1P78396 RBMY2CP-201ENST00000448575 1157 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms