Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.85□□□□□ -1.47
FOXG1P55316 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXG1P55316 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FOXG1P55316 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
FOXG1P55316 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
FOXG1P55316 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
FOXG1P55316 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FOXG1P55316 SALL4P7-201ENST00000555779 3120 ntBASIC5.85□□□□□ -1.47
FOXG1P55316 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXG1P55316 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXG1P55316 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FOXG1P55316 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXG1P55316 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC5.85□□□□□ -1.47
FOXG1P55316 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.85□□□□□ -1.47
FOXG1P55316 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.85□□□□□ -1.47
FOXG1P55316 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FOXG1P55316 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXG1P55316 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXG1P55316 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXG1P55316 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FOXG1P55316 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FOXG1P55316 AC022613.3-201ENST00000560740 1346 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 AL136520.1-201ENST00000600311 1322 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXG1P55316 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
FOXG1P55316 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXG1P55316 SNORA38B-201ENST00000363524 131 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 SNORD94-201ENST00000386037 137 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
FOXG1P55316 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXG1P55316 RN7SKP296-201ENST00000411185 341 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXG1P55316 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXG1P55316 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXG1P55316 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXG1P55316 RNF2P1-201ENST00000442955 1010 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 CEACAMP5-201ENST00000448037 961 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXG1P55316 CEACAMP11-201ENST00000455211 583 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 YRDCP3-201ENST00000456507 480 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXG1P55316 RPS7P11-201ENST00000484240 586 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.84□□□□□ -1.47
FOXG1P55316 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXG1P55316 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
FOXG1P55316 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXG1P55316 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXG1P55316 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXG1P55316 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXG1P55316 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
FOXG1P55316 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXG1P55316 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXG1P55316 AL121594.4-201ENST00000556211 1196 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.84□□□□□ -1.47
FOXG1P55316 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXG1P55316 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXG1P55316 MTND2P13-201ENST00000577438 1039 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 MIR4732-201ENST00000581873 76 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 OR1AB1P-201ENST00000585564 761 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 MIR212-201ENST00000586026 110 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXG1P55316 AC096947.1-201ENST00000603233 470 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXG1P55316 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXG1P55316 AL157392.4-201ENST00000609756 345 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXG1P55316 AC015819.1-201ENST00000613588 663 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 AC048341.3-201ENST00000619323 491 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 MIR6823-201ENST00000622118 61 ntBASIC5.84□□□□□ -1.47
FOXG1P55316 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXG1P55316 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXG1P55316 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
FOXG1P55316 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXG1P55316 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXG1P55316 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
FOXG1P55316 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXG1P55316 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.84□□□□□ -1.48
FOXG1P55316 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
FOXG1P55316 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
FOXG1P55316 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.48
FOXG1P55316 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC5.84□□□□□ -1.48
FOXG1P55316 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
FOXG1P55316 AC104162.1-201ENST00000430831 2382 ntBASIC5.84□□□□□ -1.48
FOXG1P55316 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXG1P55316 RBPJP6-201ENST00000411556 1431 ntBASIC5.83□□□□□ -1.48
FOXG1P55316 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
FOXG1P55316 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
FOXG1P55316 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXG1P55316 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXG1P55316 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXG1P55316 MTND4P9-201ENST00000507819 1346 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms