Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 PCNAP1-201ENST00000505363 709 ntBASIC7.03□□□□□ -1.28
NEK3P51956 EEF1B2P2-201ENST00000519625 676 ntBASIC7.03□□□□□ -1.28
NEK3P51956 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.03□□□□□ -1.28
NEK3P51956 AC131935.1-201ENST00000524621 333 ntBASIC7.03□□□□□ -1.28
NEK3P51956 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.03□□□□□ -1.28
NEK3P51956 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NEK3P51956 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NEK3P51956 AC068408.1-201ENST00000577406 1144 ntBASIC7.03□□□□□ -1.28
NEK3P51956 MIR4312-201ENST00000579909 76 ntBASIC7.03□□□□□ -1.28
NEK3P51956 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC7.03□□□□□ -1.28
NEK3P51956 AC087575.1-201ENST00000585087 229 ntBASIC7.03□□□□□ -1.28
NEK3P51956 HMGB1P51-201ENST00000605166 638 ntBASIC7.03□□□□□ -1.28
NEK3P51956 AC005899.6-201ENST00000620729 297 ntBASIC7.03□□□□□ -1.28
NEK3P51956 AC073862.4-201ENST00000622982 854 ntBASIC7.03□□□□□ -1.28
NEK3P51956 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.03□□□□□ -1.28
NEK3P51956 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NEK3P51956 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
NEK3P51956 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
NEK3P51956 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.03□□□□□ -1.28
NEK3P51956 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
NEK3P51956 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NEK3P51956 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
NEK3P51956 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.28
NEK3P51956 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
NEK3P51956 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
NEK3P51956 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.02□□□□□ -1.29
NEK3P51956 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NEK3P51956 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NEK3P51956 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NEK3P51956 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
NEK3P51956 BX284613.1-201ENST00000452221 1641 ntBASIC7.02□□□□□ -1.29
NEK3P51956 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.02□□□□□ -1.29
NEK3P51956 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
NEK3P51956 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.02□□□□□ -1.29
NEK3P51956 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NEK3P51956 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.02□□□□□ -1.29
NEK3P51956 RN7SKP118-201ENST00000364331 330 ntBASIC7.02□□□□□ -1.29
NEK3P51956 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.02□□□□□ -1.29
NEK3P51956 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC7.02□□□□□ -1.29
NEK3P51956 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NEK3P51956 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.02□□□□□ -1.29
NEK3P51956 RPLP1P10-201ENST00000413972 339 ntBASIC7.02□□□□□ -1.29
NEK3P51956 RPL18AP14-201ENST00000417685 526 ntBASIC7.02□□□□□ -1.29
NEK3P51956 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.02□□□□□ -1.29
NEK3P51956 RPL3P11-201ENST00000434028 1146 ntBASIC7.02□□□□□ -1.29
NEK3P51956 MTND4P15-201ENST00000437913 1033 ntBASIC7.02□□□□□ -1.29
NEK3P51956 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC7.02□□□□□ -1.29
NEK3P51956 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NEK3P51956 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.02□□□□□ -1.29
NEK3P51956 RPSAP24-201ENST00000461543 873 ntBASIC7.02□□□□□ -1.29
NEK3P51956 RN7SL372P-201ENST00000461982 298 ntBASIC7.02□□□□□ -1.29
NEK3P51956 RPS26P11-201ENST00000463445 348 ntBASIC7.02□□□□□ -1.29
NEK3P51956 RPS26P6-201ENST00000475156 348 ntBASIC7.02□□□□□ -1.29
NEK3P51956 RPL23AP80-201ENST00000495605 424 ntBASIC7.02□□□□□ -1.29
NEK3P51956 AC063943.2-201ENST00000495697 534 ntBASIC7.02□□□□□ -1.29
NEK3P51956 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.02□□□□□ -1.29
NEK3P51956 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.02□□□□□ -1.29
NEK3P51956 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.02□□□□□ -1.29
NEK3P51956 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.02□□□□□ -1.29
NEK3P51956 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.02□□□□□ -1.29
NEK3P51956 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.02□□□□□ -1.29
NEK3P51956 LINC00557-201ENST00000563184 1279 ntBASIC7.02□□□□□ -1.29
NEK3P51956 ACTG1P15-201ENST00000570019 1063 ntBASIC7.02□□□□□ -1.29
NEK3P51956 AC027796.1-201ENST00000575593 512 ntBASIC7.02□□□□□ -1.29
NEK3P51956 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.02□□□□□ -1.29
NEK3P51956 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.02□□□□□ -1.29
NEK3P51956 AL592494.3-201ENST00000609485 464 ntBASIC7.02□□□□□ -1.29
NEK3P51956 AC135068.11-201ENST00000636378 921 ntBASIC7.02□□□□□ -1.29
NEK3P51956 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
NEK3P51956 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.02□□□□□ -1.29
NEK3P51956 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
NEK3P51956 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.02□□□□□ -1.29
NEK3P51956 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
NEK3P51956 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.02□□□□□ -1.29
NEK3P51956 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.01□□□□□ -1.29
NEK3P51956 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.01□□□□□ -1.29
NEK3P51956 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
NEK3P51956 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 TATDN2P3-201ENST00000452855 3665 ntBASIC7.01□□□□□ -1.29
NEK3P51956 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
NEK3P51956 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.01□□□□□ -1.29
NEK3P51956 TRIM53CP-201ENST00000531490 1354 ntBASIC7.01□□□□□ -1.29
NEK3P51956 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 RNA5SP512-201ENST00000364550 120 ntBASIC7.01□□□□□ -1.29
NEK3P51956 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NEK3P51956 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.01□□□□□ -1.29
NEK3P51956 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.01□□□□□ -1.29
NEK3P51956 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
NEK3P51956 PSMD8P1-201ENST00000436275 769 ntBASIC7.01□□□□□ -1.29
NEK3P51956 LSM3P3-201ENST00000436601 306 ntBASIC7.01□□□□□ -1.29
NEK3P51956 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC7.01□□□□□ -1.29
NEK3P51956 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.01□□□□□ -1.29
NEK3P51956 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC7.01□□□□□ -1.29
NEK3P51956 PPIAP32-201ENST00000449940 472 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms