Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.27□□□□□ -1.09
VARSP26640 MAPK10-333ENST00000641607 2481 ntBASIC8.27□□□□□ -1.09
VARSP26640 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC8.27□□□□□ -1.09
VARSP26640 AC127502.2-201ENST00000602663 2351 ntBASIC8.27□□□□□ -1.09
VARSP26640 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC8.27□□□□□ -1.09
VARSP26640 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 MTND4P27-201ENST00000450813 1354 ntBASIC8.27□□□□□ -1.09
VARSP26640 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
VARSP26640 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 SDCBPP3-201ENST00000419629 891 ntBASIC8.27□□□□□ -1.09
VARSP26640 MYB-206ENST00000420123 1051 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 AC005534.2-201ENST00000431047 433 ntBASIC8.27□□□□□ -1.09
VARSP26640 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC8.27□□□□□ -1.09
VARSP26640 MTCO2P25-201ENST00000447065 681 ntBASIC8.27□□□□□ -1.09
VARSP26640 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC8.27□□□□□ -1.09
VARSP26640 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC8.27□□□□□ -1.09
VARSP26640 LINC00894-207ENST00000452864 750 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 BZW1P1-201ENST00000454901 1240 ntBASIC8.27□□□□□ -1.09
VARSP26640 RNU7-140P-201ENST00000459546 60 ntBASIC8.27□□□□□ -1.09
VARSP26640 AC013787.1-201ENST00000460165 307 ntBASIC8.27□□□□□ -1.09
VARSP26640 AHI1-208ENST00000488690 712 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 AC073648.3-201ENST00000504939 925 ntBASIC8.27□□□□□ -1.09
VARSP26640 MYL5-205ENST00000505477 584 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.27□□□□□ -1.09
VARSP26640 AC114786.4-201ENST00000508771 728 ntBASIC8.27□□□□□ -1.09
VARSP26640 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 PTTG3P-201ENST00000521862 606 ntBASIC8.27□□□□□ -1.09
VARSP26640 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 AP002453.2-201ENST00000533503 320 ntBASIC8.27□□□□□ -1.09
VARSP26640 GSG1-206ENST00000537302 1028 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 AC120498.4-201ENST00000561649 320 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 AC138907.5-201ENST00000561744 273 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 RPL17-212ENST00000581373 584 ntTSL 2 BASIC8.27□□□□□ -1.09
VARSP26640 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 AC018737.1-201ENST00000603900 204 ntBASIC8.27□□□□□ -1.09
VARSP26640 SEPT7P9-203ENST00000604116 343 ntBASIC8.27□□□□□ -1.09
VARSP26640 AC002059.1-201ENST00000608014 477 ntBASIC8.27□□□□□ -1.09
VARSP26640 CGA-202ENST00000610310 615 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC8.27□□□□□ -1.09
VARSP26640 GZMB-209ENST00000616551 559 ntTSL 2 BASIC8.27□□□□□ -1.09
VARSP26640 AL158209.2-201ENST00000619266 216 ntBASIC8.27□□□□□ -1.09
VARSP26640 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC8.27□□□□□ -1.09
VARSP26640 AC090574.1-201ENST00000623186 233 ntBASIC8.27□□□□□ -1.09
VARSP26640 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 AC027176.3-201ENST00000624460 586 ntBASIC8.27□□□□□ -1.09
VARSP26640 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC8.27□□□□□ -1.09
VARSP26640 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 AC079298.1-201ENST00000625026 1619 ntBASIC8.27□□□□□ -1.09
VARSP26640 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC8.27□□□□□ -1.09
VARSP26640 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 PHACTR2P1-201ENST00000605639 1414 ntBASIC8.27□□□□□ -1.09
VARSP26640 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 RN7SKP23-201ENST00000625159 4301 ntBASIC8.27□□□□□ -1.09
VARSP26640 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 AP002364.1-201ENST00000623330 3386 ntBASIC8.27□□□□□ -1.09
VARSP26640 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
VARSP26640 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARSP26640 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARSP26640 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARSP26640 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARSP26640 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARSP26640 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARSP26640 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.26□□□□□ -1.09
VARSP26640 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.26□□□□□ -1.09
VARSP26640 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARSP26640 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC8.26□□□□□ -1.09
VARSP26640 ARL6IP5-201ENST00000273258 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARSP26640 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARSP26640 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC8.26□□□□□ -1.09
VARSP26640 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARSP26640 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC8.26□□□□□ -1.09
VARSP26640 MR1-205ENST00000434571 7479 ntTSL 5 BASIC8.26□□□□□ -1.09
VARSP26640 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARSP26640 QRSL1P1-201ENST00000400977 1540 ntBASIC8.26□□□□□ -1.09
VARSP26640 MAPK10-371ENST00000641952 5209 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms