Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 MIR1203-201ENST00000408812 85 ntBASIC8.08□□□□□ -1.12
SCN11AQ9UI33 RN7SKP144-201ENST00000411108 279 ntBASIC8.08□□□□□ -1.12
SCN11AQ9UI33 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 AC011476.1-201ENST00000466725 307 ntBASIC8.08□□□□□ -1.12
SCN11AQ9UI33 RN7SL174P-201ENST00000475578 289 ntBASIC8.08□□□□□ -1.12
SCN11AQ9UI33 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 AC051619.2-201ENST00000559063 397 ntBASIC8.08□□□□□ -1.12
SCN11AQ9UI33 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
SCN11AQ9UI33 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 TMSB4XP2-201ENST00000335179 210 ntBASIC8.07□□□□□ -1.12
SCN11AQ9UI33 ZSCAN12P1-201ENST00000406489 419 ntBASIC8.07□□□□□ -1.12
SCN11AQ9UI33 GAS5-202ENST00000414075 413 ntTSL 2 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AP000281.1-201ENST00000444036 316 ntBASIC8.07□□□□□ -1.12
SCN11AQ9UI33 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 OR5H7P-201ENST00000514084 930 ntBASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 OR6M2P-201ENST00000529831 871 ntBASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AC104447.1-201ENST00000624214 2124 ntBASIC8.07□□□□□ -1.12
SCN11AQ9UI33 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 HSPD1P9-201ENST00000420325 1636 ntBASIC8.07□□□□□ -1.12
SCN11AQ9UI33 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 RNU1-134P-201ENST00000362935 165 ntBASIC8.07□□□□□ -1.12
SCN11AQ9UI33 RNU1-24P-201ENST00000364285 165 ntBASIC8.07□□□□□ -1.12
SCN11AQ9UI33 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AC020978.7-201ENST00000575953 1187 ntBASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 AL132640.3-201ENST00000630473 177 ntBASIC8.07□□□□□ -1.12
SCN11AQ9UI33 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
SCN11AQ9UI33 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
SCN11AQ9UI33 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms