Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ALMS1Q8TCU4 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 CYCSP52-201ENST00000422857 310 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC127526.2-201ENST00000426436 775 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC108693.1-201ENST00000496068 432 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC112225.1-201ENST00000508230 297 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC090236.2-201ENST00000587933 1101 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC093278.2-201ENST00000564956 2485 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 SNORA70-201ENST00000384436 135 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC009784.1-201ENST00000426484 460 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 RN7SL72P-201ENST00000460697 269 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 IGLV3-6-201ENST00000523937 250 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC092865.1-201ENST00000544395 1023 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 RPA2P1-201ENST00000556557 721 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC010998.3-201ENST00000613871 631 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC034229.6-201ENST00000623704 224 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 CASC19-222ENST00000641321 1173 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AL592429.1-201ENST00000403909 1473 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC015871.3-201ENST00000618835 2261 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 RNU4-34P-201ENST00000410431 124 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 ZNF619P1-201ENST00000446539 752 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 CBX1P2-201ENST00000453841 458 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC004815.1-201ENST00000484185 331 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC138866.2-201ENST00000508650 584 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC024651.2-201ENST00000562480 2098 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AL606490.1-201ENST00000452266 765 ntBASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC4.24□□□□□ -1.73
ALMS1Q8TCU4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms