Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 HMGN1P26-201ENST00000558737 303 ntBASIC6.83□□□□□ -1.32
LMO3Q8TAP4 AC025283.1-201ENST00000572039 734 ntBASIC6.83□□□□□ -1.32
LMO3Q8TAP4 MIR5010-201ENST00000582846 120 ntBASIC6.83□□□□□ -1.32
LMO3Q8TAP4 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 AL138693.1-201ENST00000622219 129 ntBASIC6.83□□□□□ -1.32
LMO3Q8TAP4 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 AC135068.11-201ENST00000636378 921 ntBASIC6.83□□□□□ -1.32
LMO3Q8TAP4 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
LMO3Q8TAP4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AC119674.1-213ENST00000641177 1386 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AP003175.1-201ENST00000641383 6658 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 ZNF812P-201ENST00000457674 1694 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AC003045.1-201ENST00000398779 713 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 RN7SKP129-201ENST00000410288 299 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AL121578.1-201ENST00000428051 892 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AC103563.5-201ENST00000455643 364 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 RN7SL221P-201ENST00000466190 281 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 RPL12P31-201ENST00000478433 450 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 FTH1P8-201ENST00000498161 514 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 NACAP5-201ENST00000509863 636 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AC027229.1-201ENST00000583887 253 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 MIR212-201ENST00000586026 110 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
LMO3Q8TAP4 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.82□□□□□ -1.32
LMO3Q8TAP4 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 AC022507.1-201ENST00000548349 1505 ntBASIC6.81□□□□□ -1.32
LMO3Q8TAP4 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 OR11H13P-201ENST00000359695 979 ntBASIC6.81□□□□□ -1.32
LMO3Q8TAP4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 AL157702.1-201ENST00000398764 426 ntBASIC6.81□□□□□ -1.32
LMO3Q8TAP4 OR2L9P-201ENST00000444456 913 ntBASIC6.81□□□□□ -1.32
LMO3Q8TAP4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 RN7SL393P-201ENST00000463588 296 ntBASIC6.81□□□□□ -1.32
LMO3Q8TAP4 AOX3P-204ENST00000491025 2107 ntBASIC6.81□□□□□ -1.32
LMO3Q8TAP4 GM2AP2-201ENST00000491764 562 ntBASIC6.81□□□□□ -1.32
LMO3Q8TAP4 RPL17P2-201ENST00000491913 451 ntBASIC6.81□□□□□ -1.32
LMO3Q8TAP4 AC135983.3-201ENST00000528049 1226 ntBASIC6.81□□□□□ -1.32
LMO3Q8TAP4 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.81□□□□□ -1.32
LMO3Q8TAP4 AC063977.7-201ENST00000594454 337 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms