Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 AL035555.1-201ENST00000404462 1790 ntBASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 RNA5SP156-201ENST00000410250 110 ntBASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 AC004690.1-201ENST00000418216 328 ntBASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 AC012512.1-201ENST00000446594 718 ntBASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 OR7E157P-201ENST00000494376 911 ntBASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 OR7H2P-201ENST00000513483 306 ntBASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HMCN2Q8NDA2 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 RPL23P2-201ENST00000320371 421 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 RPL24P7-201ENST00000399435 453 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 Z84478.1-201ENST00000438230 1219 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 AL034399.1-201ENST00000451535 380 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 MIR4715-201ENST00000584117 79 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 XDH-201ENST00000379416 5688 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 ZNF608-203ENST00000504926 4726 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 ZNF154-202ENST00000512439 5687 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 RNU4-4P-201ENST00000364588 130 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 AL513533.1-201ENST00000453728 415 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 NDUFA12P1-201ENST00000455914 406 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 CASC19-228ENST00000641414 1684 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 HERC2P9-206ENST00000529624 5187 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 SLC24A1-201ENST00000261892 5768 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 KDM5D-210ENST00000541639 5579 ntAPPRIS P5 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 SNORA17.1-201ENST00000362945 126 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 MIR134-201ENST00000385258 73 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 OR6E1P-201ENST00000414424 923 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 C4BPAP2-201ENST00000428434 478 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 OR52B5P-201ENST00000435337 951 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 MORF4-201ENST00000447135 971 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 AL109766.1-201ENST00000555080 552 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 OR52B5P-202ENST00000641118 1110 ntBASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 LMO7-201ENST00000321797 5647 ntTSL 5 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMCN2Q8NDA2 EXOC7P1-201ENST00000509881 2059 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms