Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF144AP50876 AC018816.2-201ENST00000621460 353 ntBASIC7.76□□□□□ -1.17
RNF144AP50876 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RNF144AP50876 AC087821.2-201ENST00000637086 450 ntBASIC7.76□□□□□ -1.17
RNF144AP50876 AC112487.2-201ENST00000637950 304 ntBASIC7.76□□□□□ -1.17
RNF144AP50876 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC7.76□□□□□ -1.17
RNF144AP50876 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF144AP50876 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF144AP50876 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RNF144AP50876 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.76□□□□□ -1.17
RNF144AP50876 AL162171.3-201ENST00000617439 3178 ntBASIC7.76□□□□□ -1.17
RNF144AP50876 OR9M1P-202ENST00000641564 3163 ntBASIC7.76□□□□□ -1.17
RNF144AP50876 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF144AP50876 TRIM60P14-201ENST00000513444 1419 ntBASIC7.76□□□□□ -1.17
RNF144AP50876 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
RNF144AP50876 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF144AP50876 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF144AP50876 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF144AP50876 MEST-203ENST00000378576 2180 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF144AP50876 AC006141.1-201ENST00000581917 2170 ntBASIC7.76□□□□□ -1.17
RNF144AP50876 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RNF144AP50876 AC020978.8-201ENST00000571975 3022 ntBASIC7.76□□□□□ -1.17
RNF144AP50876 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC7.76□□□□□ -1.17
RNF144AP50876 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 AC137056.2-201ENST00000624055 1958 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 BX284613.1-201ENST00000452221 1641 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 AC073055.1-201ENST00000456901 1621 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 Z97832.2-201ENST00000605896 4261 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 QRSL1P1-201ENST00000400977 1540 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 RNY4P14-201ENST00000363656 96 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 RNU6-1227P-201ENST00000383981 107 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 RNA5SP80-201ENST00000410475 111 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 AC068138.1-201ENST00000412635 217 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 LYPLA2P3-201ENST00000417429 576 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.75□□□□□ -1.17
RNF144AP50876 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC7.75□□□□□ -1.17
RNF144AP50876 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 LINC01865-201ENST00000430529 845 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 FECHP1-201ENST00000431896 1214 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 AC012501.2-201ENST00000437634 1281 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 IFNWP5-201ENST00000445100 588 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 MTND1P16-201ENST00000465177 898 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 AC115223.1-201ENST00000466377 870 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 AC136604.3-202ENST00000514793 485 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 ATP6V1G1P2-201ENST00000522436 346 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 AF279873.3-201ENST00000523063 766 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC7.75□□□□□ -1.17
RNF144AP50876 FAM92A1P1-201ENST00000528023 890 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 TBX5-AS1-203ENST00000531202 822 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 AC073913.2-201ENST00000541512 145 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 AC103968.1-201ENST00000557841 573 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF144AP50876 AL161729.3-201ENST00000603533 673 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC7.75□□□□□ -1.17
RNF144AP50876 AC012640.3-201ENST00000607847 430 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 CGA-202ENST00000610310 615 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 AL442067.2-201ENST00000614033 363 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF144AP50876 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 AC090574.1-201ENST00000623186 233 ntBASIC7.75□□□□□ -1.17
RNF144AP50876 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
RNF144AP50876 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF144AP50876 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms