Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 AC123769.1-201ENST00000530992 3192 ntBASIC5.55□□□□□ -1.52
HLA-DQB1P01920 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB1P01920 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 OR10D1P-201ENST00000355343 936 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 RN7SKP186-201ENST00000365371 303 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 RNA5SP280-201ENST00000411230 115 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 PRKAR1AP1-201ENST00000441422 1162 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AC092967.1-201ENST00000449016 481 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AC090602.1-201ENST00000469695 252 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 RPL7AP23-201ENST00000482625 776 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AL162632.2-201ENST00000553933 399 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AC027334.1-201ENST00000603257 310 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AC106782.7-201ENST00000624024 418 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AC133555.5-201ENST00000624430 418 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AC069542.2-201ENST00000624816 216 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 AC024651.2-201ENST00000562480 2098 ntBASIC5.54□□□□□ -1.52
HLA-DQB1P01920 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HLA-DQB1P01920 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AL121768.1-201ENST00000613917 2544 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC079753.1-201ENST00000623243 3868 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 RNU12-2P-201ENST00000364789 156 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 U3.23-201ENST00000391132 200 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 SPATA20P1-201ENST00000423089 438 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC073410.1-201ENST00000435125 589 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC092106.2-201ENST00000436597 487 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 MED28P7-201ENST00000456611 530 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AL096803.1-201ENST00000456921 1021 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 RN7SL552P-201ENST00000462094 276 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 RN7SL91P-201ENST00000469313 291 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC022730.1-201ENST00000473114 568 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 RPS26P6-201ENST00000475156 348 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 OR52H2P-201ENST00000514607 902 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AL445383.1-201ENST00000554689 874 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC015674.1-201ENST00000578482 267 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 MRPL57P1-201ENST00000621486 265 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC009120.7-201ENST00000623452 780 ntBASIC5.53□□□□□ -1.52
HLA-DQB1P01920 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DQB1P01920 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms