Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC011891.2-201ENST00000604949 397 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC004241.2-201ENST00000614562 444 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC010333.3-201ENST00000615100 402 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 MIR6806-201ENST00000622141 64 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 RAB28P4-201ENST00000622233 665 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 MROH3P-201ENST00000435735 2676 ntBASIC6.12□□□□□ -1.43
NPIPA1Q9UND3 AC093278.2-201ENST00000564956 2485 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AL359694.1-201ENST00000403247 604 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 RPL12P23-201ENST00000405880 490 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AC011742.2-201ENST00000443818 352 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AC007383.1-201ENST00000445875 636 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AC097359.1-201ENST00000447946 463 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 OR7E22P-201ENST00000478335 1035 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AC253576.1-201ENST00000511645 1156 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 Vault.2-201ENST00000516519 98 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 TDGP1-201ENST00000543961 1229 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 ANP32BP1-202ENST00000568553 737 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AC025283.1-201ENST00000572039 734 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 MIR4271-201ENST00000582451 67 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AC073862.4-201ENST00000622982 854 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AL683826.1-201ENST00000624104 627 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 SNORA16A-202ENST00000628458 135 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 AL591848.4-201ENST00000567832 3472 ntBASIC6.11□□□□□ -1.43
NPIPA1Q9UND3 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 AC083806.2-201ENST00000617795 2685 ntBASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 NEK2P4-201ENST00000425793 1329 ntBASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 AL512310.3-201ENST00000547023 1335 ntBASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 RN7SKP129-201ENST00000410288 299 ntBASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 GPN3P1-201ENST00000423883 535 ntBASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 CRYGGP-201ENST00000443337 145 ntBASIC6.1□□□□□ -1.43
NPIPA1Q9UND3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms