Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AP003486.1-201ENST00000525716 3994 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 AC092701.1-201ENST00000623627 1551 ntBASIC6.91□□□□□ -1.3
DKK3Q9UBP4 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
DKK3Q9UBP4 DLEU2L-201ENST00000371086 3555 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 PTPN2P1-201ENST00000423212 1072 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AC106901.1-201ENST00000425086 698 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AP003385.1-201ENST00000426387 893 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 RPS10P21-201ENST00000430654 475 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 LINC00328-2P-201ENST00000436585 219 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AC096632.2-201ENST00000438139 1239 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 XKRYP6-201ENST00000440468 1116 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 E2F6P3-201ENST00000441743 743 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 HMGN1P32-201ENST00000441744 256 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 XKRYP3-201ENST00000442113 1116 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AL133372.1-201ENST00000493565 745 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.9□□□□□ -1.3
DKK3Q9UBP4 MAPK10-261ENST00000641050 3109 ntBASIC6.9□□□□□ -1.3
DKK3Q9UBP4 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
DKK3Q9UBP4 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
DKK3Q9UBP4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
DKK3Q9UBP4 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
DKK3Q9UBP4 MAPK10-357ENST00000641831 2858 ntBASIC6.9□□□□□ -1.31
DKK3Q9UBP4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.9□□□□□ -1.31
DKK3Q9UBP4 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 RPL9P21-201ENST00000392269 505 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AC026310.1-201ENST00000396004 378 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 RN7SKP271-201ENST00000410528 320 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 RPSAP60-201ENST00000415403 880 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 SPATA20P1-201ENST00000423089 438 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AC000089.1-201ENST00000424559 801 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AL354893.1-201ENST00000433735 348 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 GXYLT1P1-201ENST00000446657 490 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AC068491.1-201ENST00000449539 1241 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 RPL31P11-202ENST00000454082 372 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 MEF2AP1-201ENST00000454867 863 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 FTH1P8-201ENST00000498161 514 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AC021220.1-201ENST00000507445 630 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AP003080.1-202ENST00000526526 915 ntBASIC6.89□□□□□ -1.31
DKK3Q9UBP4 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms