Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 GAPDHP57-201ENST00000424400 585 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 NMNAT1P3-201ENST00000457517 888 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC083806.1-201ENST00000468934 316 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC016559.1-201ENST00000511420 199 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 EIF3KP1-201ENST00000513279 656 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 OR7E161P-201ENST00000533722 967 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 HIGD1AP9-201ENST00000550710 279 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 CTSLP2-201ENST00000580501 394 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 FXYD6P1-201ENST00000604857 285 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 5S_rRNA.23-201ENST00000612086 102 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AL161420.1-201ENST00000619393 264 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AL109924.4-201ENST00000623089 670 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 JAML-213ENST00000640745 951 ntTSL 5 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC005332.9-201ENST00000620266 2921 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 EEF1A1P24-201ENST00000451469 1378 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AC090774.4-201ENST00000578888 1372 ntBASIC4.88□□□□□ -1.63
AP1S3Q96PC3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AP1S3Q96PC3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 CASC19-260ENST00000641828 2001 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 CASC19-228ENST00000641414 1684 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 SNORA70.5-201ENST00000365519 135 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 NPM1P38-201ENST00000403835 865 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 PAICSP2-201ENST00000429118 1150 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AL354714.5-201ENST00000450131 590 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 RPS26P11-201ENST00000463445 348 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 RPL7P17-201ENST00000470927 724 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 RN7SL216P-201ENST00000471607 298 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AC100854.1-201ENST00000520351 341 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 OR52K3P-201ENST00000531655 943 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 MIR7848-201ENST00000617402 101 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AP000577.1-201ENST00000624366 878 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AC125336.1-201ENST00000508893 2827 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 AC092451.3-201ENST00000625067 1343 ntBASIC4.87□□□□□ -1.63
AP1S3Q96PC3 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
AP1S3Q96PC3 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
AP1S3Q96PC3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
AP1S3Q96PC3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
AP1S3Q96PC3 AC112198.2-201ENST00000426589 6996 ntBASIC4.86□□□□□ -1.63
AP1S3Q96PC3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
AP1S3Q96PC3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
AP1S3Q96PC3 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC4.86□□□□□ -1.63
AP1S3Q96PC3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
AP1S3Q96PC3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms