Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SNED1Q8TER0 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SNED1Q8TER0 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SNED1Q8TER0 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
SNED1Q8TER0 BX322650.1-201ENST00000332359 2143 ntBASIC7.79□□□□□ -1.16
SNED1Q8TER0 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.79□□□□□ -1.16
SNED1Q8TER0 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 AL157884.1-201ENST00000424561 454 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 HMGN1P36-201ENST00000446623 298 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 HIGD1AP16-201ENST00000450986 258 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 RN7SL193P-201ENST00000491708 276 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 SCARNA18.1-201ENST00000516330 83 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 AC005332.4-201ENST00000592752 579 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 TATDN2P3-201ENST00000452855 3665 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 AC011455.2-201ENST00000599320 3336 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 CR788268.1-201ENST00000603931 1809 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 SNORA21-201ENST00000362423 132 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 AL354890.1-201ENST00000413730 346 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 IGLV3-4-201ENST00000432300 244 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 GAPDHP48-201ENST00000436626 961 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 RN7SL326P-201ENST00000477493 296 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 AC117395.1-201ENST00000487390 403 ntBASIC7.78□□□□□ -1.16
SNED1Q8TER0 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SNED1Q8TER0 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
SNED1Q8TER0 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.77□□□□□ -1.16
SNED1Q8TER0 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC7.77□□□□□ -1.16
SNED1Q8TER0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
SNED1Q8TER0 AC138915.4-201ENST00000565549 4147 ntBASIC7.77□□□□□ -1.16
SNED1Q8TER0 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 AC011379.1-201ENST00000508713 3025 ntBASIC7.77□□□□□ -1.17
SNED1Q8TER0 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.77□□□□□ -1.17
SNED1Q8TER0 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 AC008124.1-201ENST00000609803 9730 ntBASIC7.77□□□□□ -1.17
SNED1Q8TER0 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SNED1Q8TER0 TMSB4XP2-201ENST00000335179 210 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms