Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 HSPD1P7-201ENST00000447985 1686 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC022507.1-201ENST00000548349 1505 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC011008.2-201ENST00000624866 3352 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 OR13C3-201ENST00000374781 1108 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 SNORD116-9-201ENST00000384000 95 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 SNORD116-3-201ENST00000384287 95 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 SNORD116-7-201ENST00000384404 95 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 SNORD116-5-201ENST00000384462 95 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 MIR128-2-201ENST00000384893 84 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 VN1R33P-201ENST00000411800 887 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 PRPS1P2-201ENST00000430496 937 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 MRPL35P2-201ENST00000448009 511 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 PYM1-204ENST00000454792 884 ntTSL 2 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 CST12P-201ENST00000457644 362 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC004890.1-201ENST00000461005 181 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 RN7SL36P-201ENST00000469345 276 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC113352.1-201ENST00000513196 666 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 RN7SKP34-201ENST00000516142 244 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC104417.1-201ENST00000523974 751 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AP000619.1-201ENST00000540293 1000 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC011611.5-201ENST00000552477 578 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 RBM22P1-201ENST00000578589 1214 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 SUMO2P14-201ENST00000604488 293 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 RN7SL760P-201ENST00000607344 270 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC012640.3-201ENST00000607847 430 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC013562.2-201ENST00000611632 603 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC008121.2-201ENST00000614647 523 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC010320.5-201ENST00000619124 676 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AL121895.2-201ENST00000619558 447 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AP003068.4-201ENST00000623192 802 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AP003497.2-201ENST00000624220 967 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AL355480.4-201ENST00000626823 69 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AL357140.4-201ENST00000636827 412 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 LIPF-202ENST00000355843 1357 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 OR7E11P-202ENST00000642027 1491 ntBASIC7.54□□□□□ -1.2
PHC3Q8NDX5 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PHC3Q8NDX5 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 MAPK10-357ENST00000641831 2858 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 PSMC1P7-201ENST00000495689 1315 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 AL133268.1-201ENST00000405676 1401 ntBASIC7.53□□□□□ -1.2
PHC3Q8NDX5 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PHC3Q8NDX5 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms