Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
SCUBE3Q8IX30 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SCUBE3Q8IX30 CCT5P1-201ENST00000502314 1618 ntBASIC8.75□□□□□ -1.01
SCUBE3Q8IX30 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SCUBE3Q8IX30 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SCUBE3Q8IX30 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SCUBE3Q8IX30 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SCUBE3Q8IX30 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SCUBE3Q8IX30 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AL133384.2-201ENST00000623755 2954 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 Y_RNA.402-201ENST00000383972 102 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC114760.1-201ENST00000420310 652 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 LINC01425-202ENST00000430060 760 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 ETF1P3-201ENST00000430422 1160 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC104695.1-201ENST00000439700 849 ntTSL 3 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 USP9YP15-201ENST00000442391 422 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 FAR2P1-206ENST00000449736 709 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AL034397.1-201ENST00000456392 908 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 RN7SL146P-201ENST00000472338 297 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC022336.1-201ENST00000475510 337 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 RPL7P24-201ENST00000493052 752 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 ENPP7P10-201ENST00000504828 933 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC079395.1-201ENST00000510981 262 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 RPL10P19-201ENST00000519013 301 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AP002453.2-201ENST00000533503 320 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 CYP2C60P-201ENST00000566088 139 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC015818.5-201ENST00000578659 356 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC106900.2-201ENST00000604994 317 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC019193.2-201ENST00000610012 634 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC016876.3-201ENST00000610459 426 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC106782.6-201ENST00000611264 512 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC025287.2-201ENST00000621911 668 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC024580.1-201ENST00000623020 674 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AL356095.2-201ENST00000624025 457 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AL136140.2-201ENST00000624717 1705 ntBASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SCUBE3Q8IX30 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 EEF1A1P13-201ENST00000503537 1389 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AC138409.1-201ENST00000505001 3598 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 AL031123.3-201ENST00000623345 1837 ntBASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
SCUBE3Q8IX30 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms