Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 OR4A13P-201ENST00000529316 942 ntBASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 MIR4701-201ENST00000583094 63 ntBASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 AC016590.3-201ENST00000611171 753 ntBASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 AC116631.1-202ENST00000640984 683 ntBASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 AL133243.2-201ENST00000610331 1621 ntBASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 AL139384.2-201ENST00000613809 3590 ntBASIC7.58□□□□□ -1.2
SHROOM1Q2M3G4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 NEK2P2-201ENST00000438441 1338 ntBASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 RNA5SP188-201ENST00000362916 129 ntBASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 RPL23AP85-201ENST00000421838 433 ntBASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 AC112492.2-201ENST00000432774 1030 ntBASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 RPL5P7-201ENST00000444235 813 ntBASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 HMGB1P7-201ENST00000450921 612 ntBASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 AL133351.3-201ENST00000454998 193 ntBASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 AC009879.1-201ENST00000520029 839 ntBASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 MRPS21P8-201ENST00000569196 235 ntBASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 AL355480.1-201ENST00000629041 99 ntBASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 AC068733.2-201ENST00000605434 1418 ntBASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 AL354854.1-201ENST00000455940 1363 ntBASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
SHROOM1Q2M3G4 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 BRD7P1-201ENST00000557705 1915 ntBASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 AP003486.1-201ENST00000525716 3994 ntBASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 RBMY3AP-201ENST00000449381 1145 ntBASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 RPL12P30-201ENST00000488389 499 ntBASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 AC022206.1-201ENST00000495947 347 ntBASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 AC002310.3-201ENST00000569728 723 ntBASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 OR7A8P-201ENST00000595427 913 ntBASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 OR1N1-202ENST00000619659 939 ntBASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 CASC19-228ENST00000641414 1684 ntBASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
SHROOM1Q2M3G4 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms